Gene : Cagra.3359s0012 C. grandiflora v1.1
Defline:  (1 of 8) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  12
Name:  ? Cagra.3359s0012 Secondary Identifier:  ? PAC:28894127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3359s0012 0.5kb upstream 0.5kb upstream 2564 true Scaffold3359: 56782-59345 Capsella grandiflora
Cagra.3359s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 56782-57281 Capsella grandiflora
Cagra.3359s0012 0.5kb downstream 0.5kb downstream 2564 true Scaffold3359: 57282-59845 Capsella grandiflora
Cagra.3359s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 59346-59845 Capsella grandiflora
Cagra.3359s0012 1.0kb upstream 1.0kb upstream 3064 true Scaffold3359: 56282-59345 Capsella grandiflora
Cagra.3359s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 56282-57281 Capsella grandiflora
Cagra.3359s0012 1.0kb downstream 1.0kb downstream 3064 true Scaffold3359: 57282-60345 Capsella grandiflora
Cagra.3359s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 59346-60345 Capsella grandiflora
Cagra.3359s0012 2.0kb upstream 2.0kb upstream 4064 true Scaffold3359: 55282-59345 Capsella grandiflora
Cagra.3359s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 55282-57281 Capsella grandiflora
Cagra.3359s0012 2.0kb downstream 2.0kb downstream 4064 true Scaffold3359: 57282-61345 Capsella grandiflora
Cagra.3359s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 59346-61345 Capsella grandiflora
Cagra.3359s0012 5.0kb upstream 5.0kb upstream 7064 true Scaffold3359: 52282-59345 Capsella grandiflora
Cagra.3359s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 52282-57281 Capsella grandiflora
Cagra.3359s0012 5.0kb downstream 5.0kb downstream 4266 true Scaffold3359: 57282-61547 Capsella grandiflora
Cagra.3359s0012 5.0kb downstream 5.0kb downstream 2202 false Scaffold3359: 59346-61547 Capsella grandiflora
Cagra.3359s0012 10.0kb upstream 10.0kb upstream 12064 true Scaffold3359: 47282-59345 Capsella grandiflora
Cagra.3359s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 47282-57281 Capsella grandiflora
Cagra.3359s0012 10.0kb downstream 10.0kb downstream 4266 true Scaffold3359: 57282-61547 Capsella grandiflora
Cagra.3359s0012 10.0kb downstream 10.0kb downstream 2202 false Scaffold3359: 59346-61547 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371792 5261 Brassicaceae View MSA
123830795 5264 Brassicales-Malvales View MSA
124321693 5266 SBM View MSA
124241715 5268 Malvidae View MSA
124061893 5270 Rosid View MSA
123739259 5271 Pentapetalae View MSA
122793011 5272 Eudicot View MSA
122047188 5273 Angiosperm View MSA
121310700 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain