Gene : Cagra.3364s0021 C. grandiflora v1.1
Defline:  (1 of 5) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  21
Name:  ? Cagra.3364s0021 Secondary Identifier:  ? PAC:28903071
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3364s0021 0.5kb upstream 0.5kb upstream 2780 true Scaffold3364: 110325-113104 Capsella grandiflora
Cagra.3364s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3364: 110325-110824 Capsella grandiflora
Cagra.3364s0021 0.5kb downstream 0.5kb downstream 2780 true Scaffold3364: 110825-113604 Capsella grandiflora
Cagra.3364s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3364: 113105-113604 Capsella grandiflora
Cagra.3364s0021 1.0kb upstream 1.0kb upstream 3280 true Scaffold3364: 109825-113104 Capsella grandiflora
Cagra.3364s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3364: 109825-110824 Capsella grandiflora
Cagra.3364s0021 1.0kb downstream 1.0kb downstream 3280 true Scaffold3364: 110825-114104 Capsella grandiflora
Cagra.3364s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3364: 113105-114104 Capsella grandiflora
Cagra.3364s0021 2.0kb upstream 2.0kb upstream 4280 true Scaffold3364: 108825-113104 Capsella grandiflora
Cagra.3364s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3364: 108825-110824 Capsella grandiflora
Cagra.3364s0021 2.0kb downstream 2.0kb downstream 4280 true Scaffold3364: 110825-115104 Capsella grandiflora
Cagra.3364s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3364: 113105-115104 Capsella grandiflora
Cagra.3364s0021 5.0kb upstream 5.0kb upstream 7280 true Scaffold3364: 105825-113104 Capsella grandiflora
Cagra.3364s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3364: 105825-110824 Capsella grandiflora
Cagra.3364s0021 5.0kb downstream 5.0kb downstream 4791 true Scaffold3364: 110825-115615 Capsella grandiflora
Cagra.3364s0021 5.0kb downstream 5.0kb downstream 2511 false Scaffold3364: 113105-115615 Capsella grandiflora
Cagra.3364s0021 10.0kb upstream 10.0kb upstream 12280 true Scaffold3364: 100825-113104 Capsella grandiflora
Cagra.3364s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3364: 100825-110824 Capsella grandiflora
Cagra.3364s0021 10.0kb downstream 10.0kb downstream 4791 true Scaffold3364: 110825-115615 Capsella grandiflora
Cagra.3364s0021 10.0kb downstream 10.0kb downstream 2511 false Scaffold3364: 113105-115615 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377119 5261 Brassicaceae View MSA
123832499 5264 Brassicales-Malvales View MSA
124345020 5266 SBM View MSA
124245050 5268 Malvidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain