Gene : Cagra.3364s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22952:SF209 - BZIP TRANSCRIPTION FACTOR Genomic Order:  20
Name:  ? Cagra.3364s0020 Secondary Identifier:  ? PAC:28903061
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3364s0020 0.5kb upstream 0.5kb upstream 3293 true Scaffold3364: 104182-107474 Capsella grandiflora
Cagra.3364s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3364: 106975-107474 Capsella grandiflora
Cagra.3364s0020 0.5kb downstream 0.5kb downstream 3293 true Scaffold3364: 103682-106974 Capsella grandiflora
Cagra.3364s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3364: 103682-104181 Capsella grandiflora
Cagra.3364s0020 1.0kb upstream 1.0kb upstream 3793 true Scaffold3364: 104182-107974 Capsella grandiflora
Cagra.3364s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3364: 106975-107974 Capsella grandiflora
Cagra.3364s0020 1.0kb downstream 1.0kb downstream 3793 true Scaffold3364: 103182-106974 Capsella grandiflora
Cagra.3364s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3364: 103182-104181 Capsella grandiflora
Cagra.3364s0020 2.0kb upstream 2.0kb upstream 4793 true Scaffold3364: 104182-108974 Capsella grandiflora
Cagra.3364s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3364: 106975-108974 Capsella grandiflora
Cagra.3364s0020 2.0kb downstream 2.0kb downstream 4793 true Scaffold3364: 102182-106974 Capsella grandiflora
Cagra.3364s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3364: 102182-104181 Capsella grandiflora
Cagra.3364s0020 5.0kb upstream 5.0kb upstream 7793 true Scaffold3364: 104182-111974 Capsella grandiflora
Cagra.3364s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3364: 106975-111974 Capsella grandiflora
Cagra.3364s0020 5.0kb downstream 5.0kb downstream 7793 true Scaffold3364: 99182-106974 Capsella grandiflora
Cagra.3364s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3364: 99182-104181 Capsella grandiflora
Cagra.3364s0020 10.0kb upstream 10.0kb upstream 11434 true Scaffold3364: 104182-115615 Capsella grandiflora
Cagra.3364s0020 10.0kb upstream 10.0kb upstream 8641 false Scaffold3364: 106975-115615 Capsella grandiflora
Cagra.3364s0020 10.0kb downstream 10.0kb downstream 12793 true Scaffold3364: 94182-106974 Capsella grandiflora
Cagra.3364s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3364: 94182-104181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375596 5261 Brassicaceae View MSA
123829592 5264 Brassicales-Malvales View MSA
124339850 5266 SBM View MSA
124243665 5268 Malvidae View MSA
124070852 5270 Rosid View MSA
123737642 5271 Pentapetalae View MSA
122795655 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain