Gene : Cagra.3364s0022 C. grandiflora v1.1
Defline:  (1 of 1) PF02617 - ATP-dependent Clp protease adaptor protein ClpS (ClpS) Genomic Order:  22
Name:  ? Cagra.3364s0022 Secondary Identifier:  ? PAC:28903062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3364s0022 0.5kb upstream 0.5kb upstream 2104 true Scaffold3364: 113136-115239 Capsella grandiflora
Cagra.3364s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold3364: 114740-115239 Capsella grandiflora
Cagra.3364s0022 0.5kb downstream 0.5kb downstream 2104 true Scaffold3364: 112636-114739 Capsella grandiflora
Cagra.3364s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold3364: 112636-113135 Capsella grandiflora
Cagra.3364s0022 1.0kb upstream 1.0kb upstream 2480 true Scaffold3364: 113136-115615 Capsella grandiflora
Cagra.3364s0022 1.0kb upstream 1.0kb upstream 876 false Scaffold3364: 114740-115615 Capsella grandiflora
Cagra.3364s0022 1.0kb downstream 1.0kb downstream 2604 true Scaffold3364: 112136-114739 Capsella grandiflora
Cagra.3364s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold3364: 112136-113135 Capsella grandiflora
Cagra.3364s0022 2.0kb upstream 2.0kb upstream 2480 true Scaffold3364: 113136-115615 Capsella grandiflora
Cagra.3364s0022 2.0kb upstream 2.0kb upstream 876 false Scaffold3364: 114740-115615 Capsella grandiflora
Cagra.3364s0022 2.0kb downstream 2.0kb downstream 3604 true Scaffold3364: 111136-114739 Capsella grandiflora
Cagra.3364s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold3364: 111136-113135 Capsella grandiflora
Cagra.3364s0022 5.0kb upstream 5.0kb upstream 2480 true Scaffold3364: 113136-115615 Capsella grandiflora
Cagra.3364s0022 5.0kb upstream 5.0kb upstream 876 false Scaffold3364: 114740-115615 Capsella grandiflora
Cagra.3364s0022 5.0kb downstream 5.0kb downstream 6604 true Scaffold3364: 108136-114739 Capsella grandiflora
Cagra.3364s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold3364: 108136-113135 Capsella grandiflora
Cagra.3364s0022 10.0kb upstream 10.0kb upstream 2480 true Scaffold3364: 113136-115615 Capsella grandiflora
Cagra.3364s0022 10.0kb upstream 10.0kb upstream 876 false Scaffold3364: 114740-115615 Capsella grandiflora
Cagra.3364s0022 10.0kb downstream 10.0kb downstream 11604 true Scaffold3364: 103136-114739 Capsella grandiflora
Cagra.3364s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold3364: 103136-113135 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362401 5261 Brassicaceae View MSA
123832798 5264 Brassicales-Malvales View MSA
124346125 5266 SBM View MSA
124251445 5268 Malvidae View MSA
124067434 5270 Rosid View MSA
123745289 5271 Pentapetalae View MSA
122787169 5272 Eudicot View MSA
122042739 5273 Angiosperm View MSA
121350486 5274 Embryophyte View MSA
123426220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain