Gene : Cagra.3366s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF113 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  9
Name:  ? Cagra.3366s0009 Secondary Identifier:  ? PAC:28915128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3366s0009 0.5kb upstream 0.5kb upstream 2245 true Scaffold3366: 25460-27704 Capsella grandiflora
Cagra.3366s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3366: 27205-27704 Capsella grandiflora
Cagra.3366s0009 0.5kb downstream 0.5kb downstream 2245 true Scaffold3366: 24960-27204 Capsella grandiflora
Cagra.3366s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3366: 24960-25459 Capsella grandiflora
Cagra.3366s0009 1.0kb upstream 1.0kb upstream 2745 true Scaffold3366: 25460-28204 Capsella grandiflora
Cagra.3366s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3366: 27205-28204 Capsella grandiflora
Cagra.3366s0009 1.0kb downstream 1.0kb downstream 2745 true Scaffold3366: 24460-27204 Capsella grandiflora
Cagra.3366s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3366: 24460-25459 Capsella grandiflora
Cagra.3366s0009 2.0kb upstream 2.0kb upstream 3745 true Scaffold3366: 25460-29204 Capsella grandiflora
Cagra.3366s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3366: 27205-29204 Capsella grandiflora
Cagra.3366s0009 2.0kb downstream 2.0kb downstream 3745 true Scaffold3366: 23460-27204 Capsella grandiflora
Cagra.3366s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3366: 23460-25459 Capsella grandiflora
Cagra.3366s0009 5.0kb upstream 5.0kb upstream 6745 true Scaffold3366: 25460-32204 Capsella grandiflora
Cagra.3366s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3366: 27205-32204 Capsella grandiflora
Cagra.3366s0009 5.0kb downstream 5.0kb downstream 6745 true Scaffold3366: 20460-27204 Capsella grandiflora
Cagra.3366s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3366: 20460-25459 Capsella grandiflora
Cagra.3366s0009 10.0kb upstream 10.0kb upstream 11745 true Scaffold3366: 25460-37204 Capsella grandiflora
Cagra.3366s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3366: 27205-37204 Capsella grandiflora
Cagra.3366s0009 10.0kb downstream 10.0kb downstream 11745 true Scaffold3366: 15460-27204 Capsella grandiflora
Cagra.3366s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3366: 15460-25459 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368536 5261 Brassicaceae View MSA
123837351 5264 Brassicales-Malvales View MSA
124341520 5266 SBM View MSA
124237568 5268 Malvidae View MSA
124061198 5270 Rosid View MSA
123745994 5271 Pentapetalae View MSA
122793271 5272 Eudicot View MSA
122045683 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain