Gene : Cagra.3346s0036 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  36
Name:  ? Cagra.3346s0036 Secondary Identifier:  ? PAC:28906788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0036 0.5kb upstream 0.5kb upstream 2977 true Scaffold3346: 170182-173158 Capsella grandiflora
Cagra.3346s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 172659-173158 Capsella grandiflora
Cagra.3346s0036 0.5kb downstream 0.5kb downstream 2977 true Scaffold3346: 169682-172658 Capsella grandiflora
Cagra.3346s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 169682-170181 Capsella grandiflora
Cagra.3346s0036 1.0kb upstream 1.0kb upstream 3477 true Scaffold3346: 170182-173658 Capsella grandiflora
Cagra.3346s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 172659-173658 Capsella grandiflora
Cagra.3346s0036 1.0kb downstream 1.0kb downstream 3477 true Scaffold3346: 169182-172658 Capsella grandiflora
Cagra.3346s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 169182-170181 Capsella grandiflora
Cagra.3346s0036 2.0kb upstream 2.0kb upstream 3803 true Scaffold3346: 170182-173984 Capsella grandiflora
Cagra.3346s0036 2.0kb upstream 2.0kb upstream 1326 false Scaffold3346: 172659-173984 Capsella grandiflora
Cagra.3346s0036 2.0kb downstream 2.0kb downstream 4477 true Scaffold3346: 168182-172658 Capsella grandiflora
Cagra.3346s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 168182-170181 Capsella grandiflora
Cagra.3346s0036 5.0kb upstream 5.0kb upstream 3803 true Scaffold3346: 170182-173984 Capsella grandiflora
Cagra.3346s0036 5.0kb upstream 5.0kb upstream 1326 false Scaffold3346: 172659-173984 Capsella grandiflora
Cagra.3346s0036 5.0kb downstream 5.0kb downstream 7477 true Scaffold3346: 165182-172658 Capsella grandiflora
Cagra.3346s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 165182-170181 Capsella grandiflora
Cagra.3346s0036 10.0kb upstream 10.0kb upstream 3803 true Scaffold3346: 170182-173984 Capsella grandiflora
Cagra.3346s0036 10.0kb upstream 10.0kb upstream 1326 false Scaffold3346: 172659-173984 Capsella grandiflora
Cagra.3346s0036 10.0kb downstream 10.0kb downstream 12477 true Scaffold3346: 160182-172658 Capsella grandiflora
Cagra.3346s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 160182-170181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382059 5261 Brassicaceae View MSA
123803637 5264 Brassicales-Malvales View MSA
124300726 5266 SBM View MSA
124151843 5268 Malvidae View MSA
124075033 5270 Rosid View MSA
123746052 5271 Pentapetalae View MSA
122771756 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain