Gene : Cagra.3348s0001 C. grandiflora v1.1
Defline:  (1 of 19) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1
Name:  ? Cagra.3348s0001 Secondary Identifier:  ? PAC:28913803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3348s0001 0.5kb upstream 0.5kb upstream 2643 true Scaffold3348: 585-3227 Capsella grandiflora
Cagra.3348s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3348: 2728-3227 Capsella grandiflora
Cagra.3348s0001 0.5kb downstream 0.5kb downstream 2643 true Scaffold3348: 85-2727 Capsella grandiflora
Cagra.3348s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3348: 85-584 Capsella grandiflora
Cagra.3348s0001 1.0kb upstream 1.0kb upstream 3143 true Scaffold3348: 585-3727 Capsella grandiflora
Cagra.3348s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3348: 2728-3727 Capsella grandiflora
Cagra.3348s0001 1.0kb downstream 1.0kb downstream 2727 true Scaffold3348: 1-2727 Capsella grandiflora
Cagra.3348s0001 1.0kb downstream 1.0kb downstream 584 false Scaffold3348: 1-584 Capsella grandiflora
Cagra.3348s0001 2.0kb upstream 2.0kb upstream 4143 true Scaffold3348: 585-4727 Capsella grandiflora
Cagra.3348s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3348: 2728-4727 Capsella grandiflora
Cagra.3348s0001 2.0kb downstream 2.0kb downstream 2727 true Scaffold3348: 1-2727 Capsella grandiflora
Cagra.3348s0001 2.0kb downstream 2.0kb downstream 584 false Scaffold3348: 1-584 Capsella grandiflora
Cagra.3348s0001 5.0kb upstream 5.0kb upstream 7143 true Scaffold3348: 585-7727 Capsella grandiflora
Cagra.3348s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3348: 2728-7727 Capsella grandiflora
Cagra.3348s0001 5.0kb downstream 5.0kb downstream 2727 true Scaffold3348: 1-2727 Capsella grandiflora
Cagra.3348s0001 5.0kb downstream 5.0kb downstream 584 false Scaffold3348: 1-584 Capsella grandiflora
Cagra.3348s0001 10.0kb upstream 10.0kb upstream 12143 true Scaffold3348: 585-12727 Capsella grandiflora
Cagra.3348s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3348: 2728-12727 Capsella grandiflora
Cagra.3348s0001 10.0kb downstream 10.0kb downstream 2727 true Scaffold3348: 1-2727 Capsella grandiflora
Cagra.3348s0001 10.0kb downstream 10.0kb downstream 584 false Scaffold3348: 1-584 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362465 5261 Brassicaceae View MSA
123832754 5264 Brassicales-Malvales View MSA
124346024 5266 SBM View MSA
124241257 5268 Malvidae View MSA
124064793 5270 Rosid View MSA
123737351 5271 Pentapetalae View MSA
122791166 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain