Gene : Cagra.3346s0032 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10805 - COATOMER SUBUNIT EPSILON Genomic Order:  32
Name:  ? Cagra.3346s0032 Secondary Identifier:  ? PAC:28906808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0032 0.5kb upstream 0.5kb upstream 2247 true Scaffold3346: 157588-159834 Capsella grandiflora
Cagra.3346s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 157588-158087 Capsella grandiflora
Cagra.3346s0032 0.5kb downstream 0.5kb downstream 2247 true Scaffold3346: 158088-160334 Capsella grandiflora
Cagra.3346s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 159835-160334 Capsella grandiflora
Cagra.3346s0032 1.0kb upstream 1.0kb upstream 2747 true Scaffold3346: 157088-159834 Capsella grandiflora
Cagra.3346s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 157088-158087 Capsella grandiflora
Cagra.3346s0032 1.0kb downstream 1.0kb downstream 2747 true Scaffold3346: 158088-160834 Capsella grandiflora
Cagra.3346s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 159835-160834 Capsella grandiflora
Cagra.3346s0032 2.0kb upstream 2.0kb upstream 3747 true Scaffold3346: 156088-159834 Capsella grandiflora
Cagra.3346s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold3346: 156088-158087 Capsella grandiflora
Cagra.3346s0032 2.0kb downstream 2.0kb downstream 3747 true Scaffold3346: 158088-161834 Capsella grandiflora
Cagra.3346s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 159835-161834 Capsella grandiflora
Cagra.3346s0032 5.0kb upstream 5.0kb upstream 6747 true Scaffold3346: 153088-159834 Capsella grandiflora
Cagra.3346s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold3346: 153088-158087 Capsella grandiflora
Cagra.3346s0032 5.0kb downstream 5.0kb downstream 6747 true Scaffold3346: 158088-164834 Capsella grandiflora
Cagra.3346s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 159835-164834 Capsella grandiflora
Cagra.3346s0032 10.0kb upstream 10.0kb upstream 11747 true Scaffold3346: 148088-159834 Capsella grandiflora
Cagra.3346s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold3346: 148088-158087 Capsella grandiflora
Cagra.3346s0032 10.0kb downstream 10.0kb downstream 11747 true Scaffold3346: 158088-169834 Capsella grandiflora
Cagra.3346s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 159835-169834 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379329 5261 Brassicaceae View MSA
123839531 5264 Brassicales-Malvales View MSA
124351412 5266 SBM View MSA
124240512 5268 Malvidae View MSA
124061720 5270 Rosid View MSA
123739353 5271 Pentapetalae View MSA
122787483 5272 Eudicot View MSA
122042986 5273 Angiosperm View MSA
121344320 5274 Embryophyte View MSA
123426837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain