Gene : Cagra.3356s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12805 - KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG Genomic Order:  8
Name:  ? Cagra.3356s0007 Secondary Identifier:  ? PAC:28898157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0007 0.5kb upstream 0.5kb upstream 1665 true Scaffold3356: 40576-42240 Capsella grandiflora
Cagra.3356s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 40576-41075 Capsella grandiflora
Cagra.3356s0007 0.5kb downstream 0.5kb downstream 1665 true Scaffold3356: 41076-42740 Capsella grandiflora
Cagra.3356s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 42241-42740 Capsella grandiflora
Cagra.3356s0007 1.0kb upstream 1.0kb upstream 2165 true Scaffold3356: 40076-42240 Capsella grandiflora
Cagra.3356s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 40076-41075 Capsella grandiflora
Cagra.3356s0007 1.0kb downstream 1.0kb downstream 2165 true Scaffold3356: 41076-43240 Capsella grandiflora
Cagra.3356s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 42241-43240 Capsella grandiflora
Cagra.3356s0007 2.0kb upstream 2.0kb upstream 3165 true Scaffold3356: 39076-42240 Capsella grandiflora
Cagra.3356s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 39076-41075 Capsella grandiflora
Cagra.3356s0007 2.0kb downstream 2.0kb downstream 3165 true Scaffold3356: 41076-44240 Capsella grandiflora
Cagra.3356s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 42241-44240 Capsella grandiflora
Cagra.3356s0007 5.0kb upstream 5.0kb upstream 6165 true Scaffold3356: 36076-42240 Capsella grandiflora
Cagra.3356s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 36076-41075 Capsella grandiflora
Cagra.3356s0007 5.0kb downstream 5.0kb downstream 6165 true Scaffold3356: 41076-47240 Capsella grandiflora
Cagra.3356s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 42241-47240 Capsella grandiflora
Cagra.3356s0007 10.0kb upstream 10.0kb upstream 11165 true Scaffold3356: 31076-42240 Capsella grandiflora
Cagra.3356s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 31076-41075 Capsella grandiflora
Cagra.3356s0007 10.0kb downstream 10.0kb downstream 11165 true Scaffold3356: 41076-52240 Capsella grandiflora
Cagra.3356s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 42241-52240 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779310 5273 Angiosperm View MSA
122333532 5261 Brassicaceae Singleton cluster - no MSA
123774466 5264 Brassicales-Malvales Singleton cluster - no MSA
124272902 5266 SBM Singleton cluster - no MSA
124128633 5268 Malvidae Singleton cluster - no MSA
124039076 5270 Rosid View MSA
123742085 5271 Pentapetalae View MSA
122770191 5272 Eudicot View MSA
121050982 5274 Embryophyte View MSA
123091089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain