Gene : Cagra.3356s0029 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11361:SF21 - MUTS PROTEIN HOMOLOG 4 Genomic Order:  29
Name:  ? Cagra.3356s0029 Secondary Identifier:  ? PAC:28898148
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY1F-823 Capsella grandiflora pathologic  
Cgrandiflora PWY-3101 Capsella grandiflora pathologic  
Cgrandiflora PWY-5060 Capsella grandiflora pathologic  
Cgrandiflora PWY-5152 Capsella grandiflora pathologic  
Cgrandiflora PWY-6787 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0029 0.5kb upstream 0.5kb upstream 5689 true Scaffold3356: 107843-113531 Capsella grandiflora
Cagra.3356s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 107843-108342 Capsella grandiflora
Cagra.3356s0029 0.5kb downstream 0.5kb downstream 5689 true Scaffold3356: 108343-114031 Capsella grandiflora
Cagra.3356s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 113532-114031 Capsella grandiflora
Cagra.3356s0029 1.0kb upstream 1.0kb upstream 6189 true Scaffold3356: 107343-113531 Capsella grandiflora
Cagra.3356s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 107343-108342 Capsella grandiflora
Cagra.3356s0029 1.0kb downstream 1.0kb downstream 6189 true Scaffold3356: 108343-114531 Capsella grandiflora
Cagra.3356s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 113532-114531 Capsella grandiflora
Cagra.3356s0029 2.0kb upstream 2.0kb upstream 7189 true Scaffold3356: 106343-113531 Capsella grandiflora
Cagra.3356s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 106343-108342 Capsella grandiflora
Cagra.3356s0029 2.0kb downstream 2.0kb downstream 7189 true Scaffold3356: 108343-115531 Capsella grandiflora
Cagra.3356s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 113532-115531 Capsella grandiflora
Cagra.3356s0029 5.0kb upstream 5.0kb upstream 10189 true Scaffold3356: 103343-113531 Capsella grandiflora
Cagra.3356s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 103343-108342 Capsella grandiflora
Cagra.3356s0029 5.0kb downstream 5.0kb downstream 10189 true Scaffold3356: 108343-118531 Capsella grandiflora
Cagra.3356s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 113532-118531 Capsella grandiflora
Cagra.3356s0029 10.0kb upstream 10.0kb upstream 15189 true Scaffold3356: 98343-113531 Capsella grandiflora
Cagra.3356s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 98343-108342 Capsella grandiflora
Cagra.3356s0029 10.0kb downstream 10.0kb downstream 15189 true Scaffold3356: 108343-123531 Capsella grandiflora
Cagra.3356s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 113532-123531 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364379 5261 Brassicaceae View MSA
123833608 5264 Brassicales-Malvales View MSA
124343238 5266 SBM View MSA
124241911 5268 Malvidae View MSA
124050311 5270 Rosid View MSA
123737053 5271 Pentapetalae View MSA
122788713 5272 Eudicot View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain