Gene : Cagra.3356s0039 C. grandiflora v1.1
Defline:  (1 of 10) KOG0324 - Uncharacterized conserved protein Genomic Order:  39
Name:  ? Cagra.3356s0039 Secondary Identifier:  ? PAC:28898169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0039 0.5kb upstream 0.5kb upstream 2312 true Scaffold3356: 147982-150293 Capsella grandiflora
Cagra.3356s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 149794-150293 Capsella grandiflora
Cagra.3356s0039 0.5kb downstream 0.5kb downstream 2312 true Scaffold3356: 147482-149793 Capsella grandiflora
Cagra.3356s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 147482-147981 Capsella grandiflora
Cagra.3356s0039 1.0kb upstream 1.0kb upstream 2812 true Scaffold3356: 147982-150793 Capsella grandiflora
Cagra.3356s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 149794-150793 Capsella grandiflora
Cagra.3356s0039 1.0kb downstream 1.0kb downstream 2812 true Scaffold3356: 146982-149793 Capsella grandiflora
Cagra.3356s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 146982-147981 Capsella grandiflora
Cagra.3356s0039 2.0kb upstream 2.0kb upstream 3812 true Scaffold3356: 147982-151793 Capsella grandiflora
Cagra.3356s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 149794-151793 Capsella grandiflora
Cagra.3356s0039 2.0kb downstream 2.0kb downstream 3812 true Scaffold3356: 145982-149793 Capsella grandiflora
Cagra.3356s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 145982-147981 Capsella grandiflora
Cagra.3356s0039 5.0kb upstream 5.0kb upstream 6812 true Scaffold3356: 147982-154793 Capsella grandiflora
Cagra.3356s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 149794-154793 Capsella grandiflora
Cagra.3356s0039 5.0kb downstream 5.0kb downstream 6812 true Scaffold3356: 142982-149793 Capsella grandiflora
Cagra.3356s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 142982-147981 Capsella grandiflora
Cagra.3356s0039 10.0kb upstream 10.0kb upstream 11812 true Scaffold3356: 147982-159793 Capsella grandiflora
Cagra.3356s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 149794-159793 Capsella grandiflora
Cagra.3356s0039 10.0kb downstream 10.0kb downstream 11812 true Scaffold3356: 137982-149793 Capsella grandiflora
Cagra.3356s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 137982-147981 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378771 5261 Brassicaceae View MSA
123838088 5264 Brassicales-Malvales View MSA
124346214 5266 SBM View MSA
124240067 5268 Malvidae View MSA
124071036 5270 Rosid View MSA
123751052 5271 Pentapetalae View MSA
122794591 5272 Eudicot View MSA
122048592 5273 Angiosperm View MSA
123429049 5275 Viridiplantae View MSA
121350542 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain