Gene : Cagra.3264s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  10
Name:  ? Cagra.3264s0010 Secondary Identifier:  ? PAC:28912432
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5271 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3264s0010 0.5kb upstream 0.5kb upstream 4250 true Scaffold3264: 31981-36230 Capsella grandiflora
Cagra.3264s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3264: 35731-36230 Capsella grandiflora
Cagra.3264s0010 0.5kb downstream 0.5kb downstream 4250 true Scaffold3264: 31481-35730 Capsella grandiflora
Cagra.3264s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3264: 31481-31980 Capsella grandiflora
Cagra.3264s0010 1.0kb upstream 1.0kb upstream 4750 true Scaffold3264: 31981-36730 Capsella grandiflora
Cagra.3264s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3264: 35731-36730 Capsella grandiflora
Cagra.3264s0010 1.0kb downstream 1.0kb downstream 4750 true Scaffold3264: 30981-35730 Capsella grandiflora
Cagra.3264s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3264: 30981-31980 Capsella grandiflora
Cagra.3264s0010 2.0kb upstream 2.0kb upstream 5750 true Scaffold3264: 31981-37730 Capsella grandiflora
Cagra.3264s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3264: 35731-37730 Capsella grandiflora
Cagra.3264s0010 2.0kb downstream 2.0kb downstream 5750 true Scaffold3264: 29981-35730 Capsella grandiflora
Cagra.3264s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3264: 29981-31980 Capsella grandiflora
Cagra.3264s0010 5.0kb upstream 5.0kb upstream 8750 true Scaffold3264: 31981-40730 Capsella grandiflora
Cagra.3264s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3264: 35731-40730 Capsella grandiflora
Cagra.3264s0010 5.0kb downstream 5.0kb downstream 8750 true Scaffold3264: 26981-35730 Capsella grandiflora
Cagra.3264s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3264: 26981-31980 Capsella grandiflora
Cagra.3264s0010 10.0kb upstream 10.0kb upstream 13750 true Scaffold3264: 31981-45730 Capsella grandiflora
Cagra.3264s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3264: 35731-45730 Capsella grandiflora
Cagra.3264s0010 10.0kb downstream 10.0kb downstream 13750 true Scaffold3264: 21981-35730 Capsella grandiflora
Cagra.3264s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3264: 21981-31980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372552 5261 Brassicaceae View MSA
123831515 5264 Brassicales-Malvales View MSA
124341542 5266 SBM View MSA
124242424 5268 Malvidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain