Gene : Cagra.3304s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13774 - PHENAZINE BIOSYNTHESIS PROTEIN Genomic Order:  3
Name:  ? Cagra.3304s0003 Secondary Identifier:  ? PAC:28912560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3304s0003 0.5kb upstream 0.5kb upstream 2344 true Scaffold3304: 14882-17225 Capsella grandiflora
Cagra.3304s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3304: 14882-15381 Capsella grandiflora
Cagra.3304s0003 0.5kb downstream 0.5kb downstream 2344 true Scaffold3304: 15382-17725 Capsella grandiflora
Cagra.3304s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3304: 17226-17725 Capsella grandiflora
Cagra.3304s0003 1.0kb upstream 1.0kb upstream 2844 true Scaffold3304: 14382-17225 Capsella grandiflora
Cagra.3304s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3304: 14382-15381 Capsella grandiflora
Cagra.3304s0003 1.0kb downstream 1.0kb downstream 2844 true Scaffold3304: 15382-18225 Capsella grandiflora
Cagra.3304s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3304: 17226-18225 Capsella grandiflora
Cagra.3304s0003 2.0kb upstream 2.0kb upstream 3844 true Scaffold3304: 13382-17225 Capsella grandiflora
Cagra.3304s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3304: 13382-15381 Capsella grandiflora
Cagra.3304s0003 2.0kb downstream 2.0kb downstream 3844 true Scaffold3304: 15382-19225 Capsella grandiflora
Cagra.3304s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3304: 17226-19225 Capsella grandiflora
Cagra.3304s0003 5.0kb upstream 5.0kb upstream 6844 true Scaffold3304: 10382-17225 Capsella grandiflora
Cagra.3304s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3304: 10382-15381 Capsella grandiflora
Cagra.3304s0003 5.0kb downstream 5.0kb downstream 6194 true Scaffold3304: 15382-21575 Capsella grandiflora
Cagra.3304s0003 5.0kb downstream 5.0kb downstream 4350 false Scaffold3304: 17226-21575 Capsella grandiflora
Cagra.3304s0003 10.0kb upstream 10.0kb upstream 11844 true Scaffold3304: 5382-17225 Capsella grandiflora
Cagra.3304s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3304: 5382-15381 Capsella grandiflora
Cagra.3304s0003 10.0kb downstream 10.0kb downstream 6194 true Scaffold3304: 15382-21575 Capsella grandiflora
Cagra.3304s0003 10.0kb downstream 10.0kb downstream 4350 false Scaffold3304: 17226-21575 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379679 5261 Brassicaceae View MSA
123841343 5264 Brassicales-Malvales View MSA
124342866 5266 SBM View MSA
124238400 5268 Malvidae View MSA
124062870 5270 Rosid View MSA
123744085 5271 Pentapetalae View MSA
122793291 5272 Eudicot View MSA
122050580 5273 Angiosperm View MSA
121350321 5274 Embryophyte View MSA
123424476 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain