Gene : Cagra.3304s0001 C. grandiflora v1.1
Defline:  (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 Genomic Order:  1
Name:  ? Cagra.3304s0001 Secondary Identifier:  ? PAC:28912561
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3304s0001 0.5kb upstream 0.5kb upstream 2814 true Scaffold3304: 4290-7103 Capsella grandiflora
Cagra.3304s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3304: 6604-7103 Capsella grandiflora
Cagra.3304s0001 0.5kb downstream 0.5kb downstream 2814 true Scaffold3304: 3790-6603 Capsella grandiflora
Cagra.3304s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3304: 3790-4289 Capsella grandiflora
Cagra.3304s0001 1.0kb upstream 1.0kb upstream 3314 true Scaffold3304: 4290-7603 Capsella grandiflora
Cagra.3304s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3304: 6604-7603 Capsella grandiflora
Cagra.3304s0001 1.0kb downstream 1.0kb downstream 3314 true Scaffold3304: 3290-6603 Capsella grandiflora
Cagra.3304s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3304: 3290-4289 Capsella grandiflora
Cagra.3304s0001 2.0kb upstream 2.0kb upstream 4314 true Scaffold3304: 4290-8603 Capsella grandiflora
Cagra.3304s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3304: 6604-8603 Capsella grandiflora
Cagra.3304s0001 2.0kb downstream 2.0kb downstream 4314 true Scaffold3304: 2290-6603 Capsella grandiflora
Cagra.3304s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3304: 2290-4289 Capsella grandiflora
Cagra.3304s0001 5.0kb upstream 5.0kb upstream 7314 true Scaffold3304: 4290-11603 Capsella grandiflora
Cagra.3304s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3304: 6604-11603 Capsella grandiflora
Cagra.3304s0001 5.0kb downstream 5.0kb downstream 6603 true Scaffold3304: 1-6603 Capsella grandiflora
Cagra.3304s0001 5.0kb downstream 5.0kb downstream 4289 false Scaffold3304: 1-4289 Capsella grandiflora
Cagra.3304s0001 10.0kb upstream 10.0kb upstream 12314 true Scaffold3304: 4290-16603 Capsella grandiflora
Cagra.3304s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3304: 6604-16603 Capsella grandiflora
Cagra.3304s0001 10.0kb downstream 10.0kb downstream 6603 true Scaffold3304: 1-6603 Capsella grandiflora
Cagra.3304s0001 10.0kb downstream 10.0kb downstream 4289 false Scaffold3304: 1-4289 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380921 5261 Brassicaceae View MSA
123829333 5264 Brassicales-Malvales View MSA
124338921 5266 SBM View MSA
124252694 5268 Malvidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain