Gene : Cagra.3325s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF12 - PROTEASOME SUBUNIT ALPHA TYPE-1 Genomic Order:  7
Name:  ? Cagra.3325s0007 Secondary Identifier:  ? PAC:28897922
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3325s0007 0.5kb upstream 0.5kb upstream 2460 true Scaffold3325: 25352-27811 Capsella grandiflora
Cagra.3325s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3325: 27312-27811 Capsella grandiflora
Cagra.3325s0007 0.5kb downstream 0.5kb downstream 2460 true Scaffold3325: 24852-27311 Capsella grandiflora
Cagra.3325s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3325: 24852-25351 Capsella grandiflora
Cagra.3325s0007 1.0kb upstream 1.0kb upstream 2960 true Scaffold3325: 25352-28311 Capsella grandiflora
Cagra.3325s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3325: 27312-28311 Capsella grandiflora
Cagra.3325s0007 1.0kb downstream 1.0kb downstream 2960 true Scaffold3325: 24352-27311 Capsella grandiflora
Cagra.3325s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3325: 24352-25351 Capsella grandiflora
Cagra.3325s0007 2.0kb upstream 2.0kb upstream 3960 true Scaffold3325: 25352-29311 Capsella grandiflora
Cagra.3325s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3325: 27312-29311 Capsella grandiflora
Cagra.3325s0007 2.0kb downstream 2.0kb downstream 3960 true Scaffold3325: 23352-27311 Capsella grandiflora
Cagra.3325s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3325: 23352-25351 Capsella grandiflora
Cagra.3325s0007 5.0kb upstream 5.0kb upstream 6960 true Scaffold3325: 25352-32311 Capsella grandiflora
Cagra.3325s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3325: 27312-32311 Capsella grandiflora
Cagra.3325s0007 5.0kb downstream 5.0kb downstream 6960 true Scaffold3325: 20352-27311 Capsella grandiflora
Cagra.3325s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3325: 20352-25351 Capsella grandiflora
Cagra.3325s0007 10.0kb upstream 10.0kb upstream 11960 true Scaffold3325: 25352-37311 Capsella grandiflora
Cagra.3325s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3325: 27312-37311 Capsella grandiflora
Cagra.3325s0007 10.0kb downstream 10.0kb downstream 11960 true Scaffold3325: 15352-27311 Capsella grandiflora
Cagra.3325s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3325: 15352-25351 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367657 5261 Brassicaceae View MSA
123838687 5264 Brassicales-Malvales View MSA
124340801 5266 SBM View MSA
124251312 5268 Malvidae View MSA
124065992 5270 Rosid View MSA
123739295 5271 Pentapetalae View MSA
122791097 5272 Eudicot View MSA
122046892 5273 Angiosperm View MSA
121347001 5274 Embryophyte View MSA
123424863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain