Gene : Cagra.3346s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10209:SF171 - GIBBERELLIN 2-BETA-DIOXYGENASE 2-RELATED Genomic Order:  5
Name:  ? Cagra.3346s0005 Secondary Identifier:  ? PAC:28906817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0005 0.5kb upstream 0.5kb upstream 2075 true Scaffold3346: 17169-19243 Capsella grandiflora
Cagra.3346s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 17169-17668 Capsella grandiflora
Cagra.3346s0005 0.5kb downstream 0.5kb downstream 2075 true Scaffold3346: 17669-19743 Capsella grandiflora
Cagra.3346s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 19244-19743 Capsella grandiflora
Cagra.3346s0005 1.0kb upstream 1.0kb upstream 2575 true Scaffold3346: 16669-19243 Capsella grandiflora
Cagra.3346s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 16669-17668 Capsella grandiflora
Cagra.3346s0005 1.0kb downstream 1.0kb downstream 2575 true Scaffold3346: 17669-20243 Capsella grandiflora
Cagra.3346s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 19244-20243 Capsella grandiflora
Cagra.3346s0005 2.0kb upstream 2.0kb upstream 3575 true Scaffold3346: 15669-19243 Capsella grandiflora
Cagra.3346s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3346: 15669-17668 Capsella grandiflora
Cagra.3346s0005 2.0kb downstream 2.0kb downstream 3575 true Scaffold3346: 17669-21243 Capsella grandiflora
Cagra.3346s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 19244-21243 Capsella grandiflora
Cagra.3346s0005 5.0kb upstream 5.0kb upstream 6575 true Scaffold3346: 12669-19243 Capsella grandiflora
Cagra.3346s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3346: 12669-17668 Capsella grandiflora
Cagra.3346s0005 5.0kb downstream 5.0kb downstream 6575 true Scaffold3346: 17669-24243 Capsella grandiflora
Cagra.3346s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 19244-24243 Capsella grandiflora
Cagra.3346s0005 10.0kb upstream 10.0kb upstream 11575 true Scaffold3346: 7669-19243 Capsella grandiflora
Cagra.3346s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3346: 7669-17668 Capsella grandiflora
Cagra.3346s0005 10.0kb downstream 10.0kb downstream 11575 true Scaffold3346: 17669-29243 Capsella grandiflora
Cagra.3346s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 19244-29243 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511089 5273 Angiosperm View MSA
122372088 5261 Brassicaceae View MSA
123800292 5264 Brassicales-Malvales View MSA
124297723 5266 SBM View MSA
124149544 5268 Malvidae View MSA
123875332 5270 Rosid View MSA
123459171 5271 Pentapetalae View MSA
122494566 5272 Eudicot View MSA
120784155 5274 Embryophyte View MSA
122826090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain