Gene : Cagra.3346s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12416:SF3 - RRNA-PROCESSING PROTEIN UTP23 HOMOLOG Genomic Order:  7
Name:  ? Cagra.3346s0007 Secondary Identifier:  ? PAC:28906804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0007 0.5kb upstream 0.5kb upstream 2155 true Scaffold3346: 23202-25356 Capsella grandiflora
Cagra.3346s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 24857-25356 Capsella grandiflora
Cagra.3346s0007 0.5kb downstream 0.5kb downstream 2155 true Scaffold3346: 22702-24856 Capsella grandiflora
Cagra.3346s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 22702-23201 Capsella grandiflora
Cagra.3346s0007 1.0kb upstream 1.0kb upstream 2655 true Scaffold3346: 23202-25856 Capsella grandiflora
Cagra.3346s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 24857-25856 Capsella grandiflora
Cagra.3346s0007 1.0kb downstream 1.0kb downstream 2655 true Scaffold3346: 22202-24856 Capsella grandiflora
Cagra.3346s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 22202-23201 Capsella grandiflora
Cagra.3346s0007 2.0kb upstream 2.0kb upstream 3655 true Scaffold3346: 23202-26856 Capsella grandiflora
Cagra.3346s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3346: 24857-26856 Capsella grandiflora
Cagra.3346s0007 2.0kb downstream 2.0kb downstream 3655 true Scaffold3346: 21202-24856 Capsella grandiflora
Cagra.3346s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 21202-23201 Capsella grandiflora
Cagra.3346s0007 5.0kb upstream 5.0kb upstream 6655 true Scaffold3346: 23202-29856 Capsella grandiflora
Cagra.3346s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3346: 24857-29856 Capsella grandiflora
Cagra.3346s0007 5.0kb downstream 5.0kb downstream 6655 true Scaffold3346: 18202-24856 Capsella grandiflora
Cagra.3346s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 18202-23201 Capsella grandiflora
Cagra.3346s0007 10.0kb upstream 10.0kb upstream 11655 true Scaffold3346: 23202-34856 Capsella grandiflora
Cagra.3346s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3346: 24857-34856 Capsella grandiflora
Cagra.3346s0007 10.0kb downstream 10.0kb downstream 11655 true Scaffold3346: 13202-24856 Capsella grandiflora
Cagra.3346s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 13202-23201 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365106 5261 Brassicaceae View MSA
123833830 5264 Brassicales-Malvales View MSA
124339210 5266 SBM View MSA
124239646 5268 Malvidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain