Gene : Cagra.3346s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13068:SF6 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  13
Name:  ? Cagra.3346s0013 Secondary Identifier:  ? PAC:28906802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0013 0.5kb upstream 0.5kb upstream 1691 true Scaffold3346: 36963-38653 Capsella grandiflora
Cagra.3346s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 36963-37462 Capsella grandiflora
Cagra.3346s0013 0.5kb downstream 0.5kb downstream 1691 true Scaffold3346: 37463-39153 Capsella grandiflora
Cagra.3346s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 38654-39153 Capsella grandiflora
Cagra.3346s0013 1.0kb upstream 1.0kb upstream 2191 true Scaffold3346: 36463-38653 Capsella grandiflora
Cagra.3346s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 36463-37462 Capsella grandiflora
Cagra.3346s0013 1.0kb downstream 1.0kb downstream 2191 true Scaffold3346: 37463-39653 Capsella grandiflora
Cagra.3346s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 38654-39653 Capsella grandiflora
Cagra.3346s0013 2.0kb upstream 2.0kb upstream 3191 true Scaffold3346: 35463-38653 Capsella grandiflora
Cagra.3346s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold3346: 35463-37462 Capsella grandiflora
Cagra.3346s0013 2.0kb downstream 2.0kb downstream 3191 true Scaffold3346: 37463-40653 Capsella grandiflora
Cagra.3346s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 38654-40653 Capsella grandiflora
Cagra.3346s0013 5.0kb upstream 5.0kb upstream 6191 true Scaffold3346: 32463-38653 Capsella grandiflora
Cagra.3346s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold3346: 32463-37462 Capsella grandiflora
Cagra.3346s0013 5.0kb downstream 5.0kb downstream 6191 true Scaffold3346: 37463-43653 Capsella grandiflora
Cagra.3346s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 38654-43653 Capsella grandiflora
Cagra.3346s0013 10.0kb upstream 10.0kb upstream 11191 true Scaffold3346: 27463-38653 Capsella grandiflora
Cagra.3346s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold3346: 27463-37462 Capsella grandiflora
Cagra.3346s0013 10.0kb downstream 10.0kb downstream 11191 true Scaffold3346: 37463-48653 Capsella grandiflora
Cagra.3346s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 38654-48653 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364313 5261 Brassicaceae View MSA
123828633 5264 Brassicales-Malvales View MSA
124341586 5266 SBM View MSA
124241343 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain