Gene : Cagra.3132s0007 C. grandiflora v1.1
Defline:  (1 of 2) PF13415//PF13418 - Galactose oxidase, central domain (Kelch_3) // Galactose oxidase, central domain (Kelch_4) Genomic Order:  7
Name:  ? Cagra.3132s0007 Secondary Identifier:  ? PAC:28904880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0007 0.5kb upstream 0.5kb upstream 3522 true Scaffold3132: 19788-23309 Capsella grandiflora
Cagra.3132s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 19788-20287 Capsella grandiflora
Cagra.3132s0007 0.5kb downstream 0.5kb downstream 3522 true Scaffold3132: 20288-23809 Capsella grandiflora
Cagra.3132s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 23310-23809 Capsella grandiflora
Cagra.3132s0007 1.0kb upstream 1.0kb upstream 4022 true Scaffold3132: 19288-23309 Capsella grandiflora
Cagra.3132s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 19288-20287 Capsella grandiflora
Cagra.3132s0007 1.0kb downstream 1.0kb downstream 4022 true Scaffold3132: 20288-24309 Capsella grandiflora
Cagra.3132s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 23310-24309 Capsella grandiflora
Cagra.3132s0007 2.0kb upstream 2.0kb upstream 5022 true Scaffold3132: 18288-23309 Capsella grandiflora
Cagra.3132s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 18288-20287 Capsella grandiflora
Cagra.3132s0007 2.0kb downstream 2.0kb downstream 5022 true Scaffold3132: 20288-25309 Capsella grandiflora
Cagra.3132s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 23310-25309 Capsella grandiflora
Cagra.3132s0007 5.0kb upstream 5.0kb upstream 8022 true Scaffold3132: 15288-23309 Capsella grandiflora
Cagra.3132s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 15288-20287 Capsella grandiflora
Cagra.3132s0007 5.0kb downstream 5.0kb downstream 8022 true Scaffold3132: 20288-28309 Capsella grandiflora
Cagra.3132s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 23310-28309 Capsella grandiflora
Cagra.3132s0007 10.0kb upstream 10.0kb upstream 13022 true Scaffold3132: 10288-23309 Capsella grandiflora
Cagra.3132s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 10288-20287 Capsella grandiflora
Cagra.3132s0007 10.0kb downstream 10.0kb downstream 13022 true Scaffold3132: 20288-33309 Capsella grandiflora
Cagra.3132s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 23310-33309 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371946 5261 Brassicaceae View MSA
123836990 5264 Brassicales-Malvales View MSA
124337504 5266 SBM View MSA
124239908 5268 Malvidae View MSA
124062622 5270 Rosid View MSA
123743479 5271 Pentapetalae View MSA
122792460 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain