Gene : Cagra.3132s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23344//PTHR23344:SF19 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE Genomic Order:  9
Name:  ? Cagra.3132s0009 Secondary Identifier:  ? PAC:28904887
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7409 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0009 0.5kb upstream 0.5kb upstream 2258 true Scaffold3132: 32533-34790 Capsella grandiflora
Cagra.3132s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 32533-33032 Capsella grandiflora
Cagra.3132s0009 0.5kb downstream 0.5kb downstream 2258 true Scaffold3132: 33033-35290 Capsella grandiflora
Cagra.3132s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 34791-35290 Capsella grandiflora
Cagra.3132s0009 1.0kb upstream 1.0kb upstream 2758 true Scaffold3132: 32033-34790 Capsella grandiflora
Cagra.3132s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 32033-33032 Capsella grandiflora
Cagra.3132s0009 1.0kb downstream 1.0kb downstream 2758 true Scaffold3132: 33033-35790 Capsella grandiflora
Cagra.3132s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 34791-35790 Capsella grandiflora
Cagra.3132s0009 2.0kb upstream 2.0kb upstream 3758 true Scaffold3132: 31033-34790 Capsella grandiflora
Cagra.3132s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 31033-33032 Capsella grandiflora
Cagra.3132s0009 2.0kb downstream 2.0kb downstream 3758 true Scaffold3132: 33033-36790 Capsella grandiflora
Cagra.3132s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 34791-36790 Capsella grandiflora
Cagra.3132s0009 5.0kb upstream 5.0kb upstream 6758 true Scaffold3132: 28033-34790 Capsella grandiflora
Cagra.3132s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 28033-33032 Capsella grandiflora
Cagra.3132s0009 5.0kb downstream 5.0kb downstream 6758 true Scaffold3132: 33033-39790 Capsella grandiflora
Cagra.3132s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 34791-39790 Capsella grandiflora
Cagra.3132s0009 10.0kb upstream 10.0kb upstream 11758 true Scaffold3132: 23033-34790 Capsella grandiflora
Cagra.3132s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 23033-33032 Capsella grandiflora
Cagra.3132s0009 10.0kb downstream 10.0kb downstream 11758 true Scaffold3132: 33033-44790 Capsella grandiflora
Cagra.3132s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 34791-44790 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375222 5261 Brassicaceae View MSA
123837095 5264 Brassicales-Malvales View MSA
124341825 5266 SBM View MSA
124250992 5268 Malvidae View MSA
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain