Gene : Cagra.3132s0008 C. grandiflora v1.1
Defline:  (1 of 9) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  8
Name:  ? Cagra.3132s0008 Secondary Identifier:  ? PAC:28904875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0008 0.5kb upstream 0.5kb upstream 5714 true Scaffold3132: 25477-31190 Capsella grandiflora
Cagra.3132s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 25477-25976 Capsella grandiflora
Cagra.3132s0008 0.5kb downstream 0.5kb downstream 5714 true Scaffold3132: 25977-31690 Capsella grandiflora
Cagra.3132s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 31191-31690 Capsella grandiflora
Cagra.3132s0008 1.0kb upstream 1.0kb upstream 6214 true Scaffold3132: 24977-31190 Capsella grandiflora
Cagra.3132s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 24977-25976 Capsella grandiflora
Cagra.3132s0008 1.0kb downstream 1.0kb downstream 6214 true Scaffold3132: 25977-32190 Capsella grandiflora
Cagra.3132s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 31191-32190 Capsella grandiflora
Cagra.3132s0008 2.0kb upstream 2.0kb upstream 7214 true Scaffold3132: 23977-31190 Capsella grandiflora
Cagra.3132s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 23977-25976 Capsella grandiflora
Cagra.3132s0008 2.0kb downstream 2.0kb downstream 7214 true Scaffold3132: 25977-33190 Capsella grandiflora
Cagra.3132s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 31191-33190 Capsella grandiflora
Cagra.3132s0008 5.0kb upstream 5.0kb upstream 10214 true Scaffold3132: 20977-31190 Capsella grandiflora
Cagra.3132s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 20977-25976 Capsella grandiflora
Cagra.3132s0008 5.0kb downstream 5.0kb downstream 10214 true Scaffold3132: 25977-36190 Capsella grandiflora
Cagra.3132s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 31191-36190 Capsella grandiflora
Cagra.3132s0008 10.0kb upstream 10.0kb upstream 15214 true Scaffold3132: 15977-31190 Capsella grandiflora
Cagra.3132s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 15977-25976 Capsella grandiflora
Cagra.3132s0008 10.0kb downstream 10.0kb downstream 15214 true Scaffold3132: 25977-41190 Capsella grandiflora
Cagra.3132s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 31191-41190 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362635 5261 Brassicaceae View MSA
123835119 5264 Brassicales-Malvales View MSA
124339016 5266 SBM View MSA
124238980 5268 Malvidae View MSA
124062357 5270 Rosid View MSA
123739411 5271 Pentapetalae View MSA
122786365 5272 Eudicot View MSA
122043691 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain