Gene : Cagra.3132s0011 C. grandiflora v1.1
Defline:  (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  11
Name:  ? Cagra.3132s0011 Secondary Identifier:  ? PAC:28904892
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0011 0.5kb upstream 0.5kb upstream 2902 true Scaffold3132: 36065-38966 Capsella grandiflora
Cagra.3132s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 36065-36564 Capsella grandiflora
Cagra.3132s0011 0.5kb downstream 0.5kb downstream 2902 true Scaffold3132: 36565-39466 Capsella grandiflora
Cagra.3132s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 38967-39466 Capsella grandiflora
Cagra.3132s0011 1.0kb upstream 1.0kb upstream 3402 true Scaffold3132: 35565-38966 Capsella grandiflora
Cagra.3132s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 35565-36564 Capsella grandiflora
Cagra.3132s0011 1.0kb downstream 1.0kb downstream 3402 true Scaffold3132: 36565-39966 Capsella grandiflora
Cagra.3132s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 38967-39966 Capsella grandiflora
Cagra.3132s0011 2.0kb upstream 2.0kb upstream 4402 true Scaffold3132: 34565-38966 Capsella grandiflora
Cagra.3132s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 34565-36564 Capsella grandiflora
Cagra.3132s0011 2.0kb downstream 2.0kb downstream 4402 true Scaffold3132: 36565-40966 Capsella grandiflora
Cagra.3132s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 38967-40966 Capsella grandiflora
Cagra.3132s0011 5.0kb upstream 5.0kb upstream 7402 true Scaffold3132: 31565-38966 Capsella grandiflora
Cagra.3132s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 31565-36564 Capsella grandiflora
Cagra.3132s0011 5.0kb downstream 5.0kb downstream 7402 true Scaffold3132: 36565-43966 Capsella grandiflora
Cagra.3132s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 38967-43966 Capsella grandiflora
Cagra.3132s0011 10.0kb upstream 10.0kb upstream 12402 true Scaffold3132: 26565-38966 Capsella grandiflora
Cagra.3132s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 26565-36564 Capsella grandiflora
Cagra.3132s0011 10.0kb downstream 10.0kb downstream 12402 true Scaffold3132: 36565-48966 Capsella grandiflora
Cagra.3132s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 38967-48966 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379647 5261 Brassicaceae View MSA
123838425 5264 Brassicales-Malvales View MSA
124322450 5266 SBM View MSA
124238002 5268 Malvidae View MSA
124065673 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain