Gene : Cagra.3132s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF116 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  18
Name:  ? Cagra.3132s0018 Secondary Identifier:  ? PAC:28904889
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0018 0.5kb upstream 0.5kb upstream 3776 true Scaffold3132: 55048-58823 Capsella grandiflora
Cagra.3132s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 58324-58823 Capsella grandiflora
Cagra.3132s0018 0.5kb downstream 0.5kb downstream 3776 true Scaffold3132: 54548-58323 Capsella grandiflora
Cagra.3132s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 54548-55047 Capsella grandiflora
Cagra.3132s0018 1.0kb upstream 1.0kb upstream 4276 true Scaffold3132: 55048-59323 Capsella grandiflora
Cagra.3132s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 58324-59323 Capsella grandiflora
Cagra.3132s0018 1.0kb downstream 1.0kb downstream 4276 true Scaffold3132: 54048-58323 Capsella grandiflora
Cagra.3132s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 54048-55047 Capsella grandiflora
Cagra.3132s0018 2.0kb upstream 2.0kb upstream 5276 true Scaffold3132: 55048-60323 Capsella grandiflora
Cagra.3132s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 58324-60323 Capsella grandiflora
Cagra.3132s0018 2.0kb downstream 2.0kb downstream 5276 true Scaffold3132: 53048-58323 Capsella grandiflora
Cagra.3132s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 53048-55047 Capsella grandiflora
Cagra.3132s0018 5.0kb upstream 5.0kb upstream 8276 true Scaffold3132: 55048-63323 Capsella grandiflora
Cagra.3132s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 58324-63323 Capsella grandiflora
Cagra.3132s0018 5.0kb downstream 5.0kb downstream 8276 true Scaffold3132: 50048-58323 Capsella grandiflora
Cagra.3132s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 50048-55047 Capsella grandiflora
Cagra.3132s0018 10.0kb upstream 10.0kb upstream 13276 true Scaffold3132: 55048-68323 Capsella grandiflora
Cagra.3132s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 58324-68323 Capsella grandiflora
Cagra.3132s0018 10.0kb downstream 10.0kb downstream 13276 true Scaffold3132: 45048-58323 Capsella grandiflora
Cagra.3132s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 45048-55047 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373897 5261 Brassicaceae View MSA
123828515 5264 Brassicales-Malvales View MSA
124338443 5266 SBM View MSA
124237677 5268 Malvidae View MSA
124060860 5270 Rosid View MSA
123747795 5271 Pentapetalae View MSA
122795236 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain