Gene : Cagra.3132s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15039:SF11 - DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN Genomic Order:  21
Name:  ? Cagra.3132s0021 Secondary Identifier:  ? PAC:28904894
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0021 0.5kb upstream 0.5kb upstream 4073 true Scaffold3132: 67095-71167 Capsella grandiflora
Cagra.3132s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 70668-71167 Capsella grandiflora
Cagra.3132s0021 0.5kb downstream 0.5kb downstream 4073 true Scaffold3132: 66595-70667 Capsella grandiflora
Cagra.3132s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 66595-67094 Capsella grandiflora
Cagra.3132s0021 1.0kb upstream 1.0kb upstream 4573 true Scaffold3132: 67095-71667 Capsella grandiflora
Cagra.3132s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 70668-71667 Capsella grandiflora
Cagra.3132s0021 1.0kb downstream 1.0kb downstream 4573 true Scaffold3132: 66095-70667 Capsella grandiflora
Cagra.3132s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 66095-67094 Capsella grandiflora
Cagra.3132s0021 2.0kb upstream 2.0kb upstream 5573 true Scaffold3132: 67095-72667 Capsella grandiflora
Cagra.3132s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 70668-72667 Capsella grandiflora
Cagra.3132s0021 2.0kb downstream 2.0kb downstream 5573 true Scaffold3132: 65095-70667 Capsella grandiflora
Cagra.3132s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 65095-67094 Capsella grandiflora
Cagra.3132s0021 5.0kb upstream 5.0kb upstream 8573 true Scaffold3132: 67095-75667 Capsella grandiflora
Cagra.3132s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 70668-75667 Capsella grandiflora
Cagra.3132s0021 5.0kb downstream 5.0kb downstream 8573 true Scaffold3132: 62095-70667 Capsella grandiflora
Cagra.3132s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 62095-67094 Capsella grandiflora
Cagra.3132s0021 10.0kb upstream 10.0kb upstream 13573 true Scaffold3132: 67095-80667 Capsella grandiflora
Cagra.3132s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 70668-80667 Capsella grandiflora
Cagra.3132s0021 10.0kb downstream 10.0kb downstream 13573 true Scaffold3132: 57095-70667 Capsella grandiflora
Cagra.3132s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 57095-67094 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378968 5261 Brassicaceae View MSA
123840858 5264 Brassicales-Malvales View MSA
124347003 5266 SBM View MSA
124245630 5268 Malvidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain