Gene : Cagra.3198s0002 C. grandiflora v1.1
Genomic Order:  2 Name:  ? Cagra.3198s0002
Secondary Identifier:  ? PAC:28897860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3198s0002 0.5kb upstream 0.5kb upstream 1009 true Scaffold3198: 4673-5681 Capsella grandiflora
Cagra.3198s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3198: 4673-5172 Capsella grandiflora
Cagra.3198s0002 0.5kb downstream 0.5kb downstream 1009 true Scaffold3198: 5173-6181 Capsella grandiflora
Cagra.3198s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3198: 5682-6181 Capsella grandiflora
Cagra.3198s0002 1.0kb upstream 1.0kb upstream 1509 true Scaffold3198: 4173-5681 Capsella grandiflora
Cagra.3198s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3198: 4173-5172 Capsella grandiflora
Cagra.3198s0002 1.0kb downstream 1.0kb downstream 1509 true Scaffold3198: 5173-6681 Capsella grandiflora
Cagra.3198s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3198: 5682-6681 Capsella grandiflora
Cagra.3198s0002 2.0kb upstream 2.0kb upstream 2509 true Scaffold3198: 3173-5681 Capsella grandiflora
Cagra.3198s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3198: 3173-5172 Capsella grandiflora
Cagra.3198s0002 2.0kb downstream 2.0kb downstream 2509 true Scaffold3198: 5173-7681 Capsella grandiflora
Cagra.3198s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3198: 5682-7681 Capsella grandiflora
Cagra.3198s0002 5.0kb upstream 5.0kb upstream 5509 true Scaffold3198: 173-5681 Capsella grandiflora
Cagra.3198s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3198: 173-5172 Capsella grandiflora
Cagra.3198s0002 5.0kb downstream 5.0kb downstream 5509 true Scaffold3198: 5173-10681 Capsella grandiflora
Cagra.3198s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3198: 5682-10681 Capsella grandiflora
Cagra.3198s0002 10.0kb upstream 10.0kb upstream 5681 true Scaffold3198: 1-5681 Capsella grandiflora
Cagra.3198s0002 10.0kb upstream 10.0kb upstream 5172 false Scaffold3198: 1-5172 Capsella grandiflora
Cagra.3198s0002 10.0kb downstream 10.0kb downstream 10509 true Scaffold3198: 5173-15681 Capsella grandiflora
Cagra.3198s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3198: 5682-15681 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376810 5261 Brassicaceae View MSA
123839258 5264 Brassicales-Malvales View MSA
124337718 5266 SBM View MSA
124238380 5268 Malvidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain