Gene : Cagra.3217s0006 C. grandiflora v1.1
Defline:  (1 of 14) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  6
Name:  ? Cagra.3217s0006 Secondary Identifier:  ? PAC:28908317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3217s0006 0.5kb upstream 0.5kb upstream 3489 true Scaffold3217: 22031-25519 Capsella grandiflora
Cagra.3217s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3217: 22031-22530 Capsella grandiflora
Cagra.3217s0006 0.5kb downstream 0.5kb downstream 3489 true Scaffold3217: 22531-26019 Capsella grandiflora
Cagra.3217s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3217: 25520-26019 Capsella grandiflora
Cagra.3217s0006 1.0kb upstream 1.0kb upstream 3989 true Scaffold3217: 21531-25519 Capsella grandiflora
Cagra.3217s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3217: 21531-22530 Capsella grandiflora
Cagra.3217s0006 1.0kb downstream 1.0kb downstream 3989 true Scaffold3217: 22531-26519 Capsella grandiflora
Cagra.3217s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3217: 25520-26519 Capsella grandiflora
Cagra.3217s0006 2.0kb upstream 2.0kb upstream 4989 true Scaffold3217: 20531-25519 Capsella grandiflora
Cagra.3217s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3217: 20531-22530 Capsella grandiflora
Cagra.3217s0006 2.0kb downstream 2.0kb downstream 4989 true Scaffold3217: 22531-27519 Capsella grandiflora
Cagra.3217s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3217: 25520-27519 Capsella grandiflora
Cagra.3217s0006 5.0kb upstream 5.0kb upstream 7989 true Scaffold3217: 17531-25519 Capsella grandiflora
Cagra.3217s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3217: 17531-22530 Capsella grandiflora
Cagra.3217s0006 5.0kb downstream 5.0kb downstream 7989 true Scaffold3217: 22531-30519 Capsella grandiflora
Cagra.3217s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3217: 25520-30519 Capsella grandiflora
Cagra.3217s0006 10.0kb upstream 10.0kb upstream 12989 true Scaffold3217: 12531-25519 Capsella grandiflora
Cagra.3217s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3217: 12531-22530 Capsella grandiflora
Cagra.3217s0006 10.0kb downstream 10.0kb downstream 12989 true Scaffold3217: 22531-35519 Capsella grandiflora
Cagra.3217s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3217: 25520-35519 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364239 5261 Brassicaceae View MSA
123836988 5264 Brassicales-Malvales View MSA
124341544 5266 SBM View MSA
124243813 5268 Malvidae View MSA
124064039 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain