Gene : Cagra.3181s0004 C. grandiflora v1.1
Defline:  (1 of 34) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  4
Name:  ? Cagra.3181s0004 Secondary Identifier:  ? PAC:28912176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3181s0004 0.5kb upstream 0.5kb upstream 3720 true Scaffold3181: 5472-9191 Capsella grandiflora
Cagra.3181s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3181: 8692-9191 Capsella grandiflora
Cagra.3181s0004 0.5kb downstream 0.5kb downstream 3720 true Scaffold3181: 4972-8691 Capsella grandiflora
Cagra.3181s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3181: 4972-5471 Capsella grandiflora
Cagra.3181s0004 1.0kb upstream 1.0kb upstream 4220 true Scaffold3181: 5472-9691 Capsella grandiflora
Cagra.3181s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3181: 8692-9691 Capsella grandiflora
Cagra.3181s0004 1.0kb downstream 1.0kb downstream 4220 true Scaffold3181: 4472-8691 Capsella grandiflora
Cagra.3181s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3181: 4472-5471 Capsella grandiflora
Cagra.3181s0004 2.0kb upstream 2.0kb upstream 5220 true Scaffold3181: 5472-10691 Capsella grandiflora
Cagra.3181s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3181: 8692-10691 Capsella grandiflora
Cagra.3181s0004 2.0kb downstream 2.0kb downstream 5220 true Scaffold3181: 3472-8691 Capsella grandiflora
Cagra.3181s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3181: 3472-5471 Capsella grandiflora
Cagra.3181s0004 5.0kb upstream 5.0kb upstream 8220 true Scaffold3181: 5472-13691 Capsella grandiflora
Cagra.3181s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3181: 8692-13691 Capsella grandiflora
Cagra.3181s0004 5.0kb downstream 5.0kb downstream 8220 true Scaffold3181: 472-8691 Capsella grandiflora
Cagra.3181s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3181: 472-5471 Capsella grandiflora
Cagra.3181s0004 10.0kb upstream 10.0kb upstream 13220 true Scaffold3181: 5472-18691 Capsella grandiflora
Cagra.3181s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3181: 8692-18691 Capsella grandiflora
Cagra.3181s0004 10.0kb downstream 10.0kb downstream 8691 true Scaffold3181: 1-8691 Capsella grandiflora
Cagra.3181s0004 10.0kb downstream 10.0kb downstream 5471 false Scaffold3181: 1-5471 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360875 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain