Gene : Cagra.3030s0005 C. grandiflora v1.1
Defline:  (1 of 4) KOG0987 - DNA helicase PIF1/RRM3 Genomic Order:  5
Name:  ? Cagra.3030s0005 Secondary Identifier:  ? PAC:28901625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3030s0005 0.5kb upstream 0.5kb upstream 6910 true Scaffold3030: 84510-91419 Capsella grandiflora
Cagra.3030s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3030: 90920-91419 Capsella grandiflora
Cagra.3030s0005 0.5kb downstream 0.5kb downstream 6910 true Scaffold3030: 84010-90919 Capsella grandiflora
Cagra.3030s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3030: 84010-84509 Capsella grandiflora
Cagra.3030s0005 1.0kb upstream 1.0kb upstream 7410 true Scaffold3030: 84510-91919 Capsella grandiflora
Cagra.3030s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3030: 90920-91919 Capsella grandiflora
Cagra.3030s0005 1.0kb downstream 1.0kb downstream 7410 true Scaffold3030: 83510-90919 Capsella grandiflora
Cagra.3030s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3030: 83510-84509 Capsella grandiflora
Cagra.3030s0005 2.0kb upstream 2.0kb upstream 8410 true Scaffold3030: 84510-92919 Capsella grandiflora
Cagra.3030s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3030: 90920-92919 Capsella grandiflora
Cagra.3030s0005 2.0kb downstream 2.0kb downstream 8410 true Scaffold3030: 82510-90919 Capsella grandiflora
Cagra.3030s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3030: 82510-84509 Capsella grandiflora
Cagra.3030s0005 5.0kb upstream 5.0kb upstream 11410 true Scaffold3030: 84510-95919 Capsella grandiflora
Cagra.3030s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3030: 90920-95919 Capsella grandiflora
Cagra.3030s0005 5.0kb downstream 5.0kb downstream 11410 true Scaffold3030: 79510-90919 Capsella grandiflora
Cagra.3030s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3030: 79510-84509 Capsella grandiflora
Cagra.3030s0005 10.0kb upstream 10.0kb upstream 11780 true Scaffold3030: 84510-96289 Capsella grandiflora
Cagra.3030s0005 10.0kb upstream 10.0kb upstream 5370 false Scaffold3030: 90920-96289 Capsella grandiflora
Cagra.3030s0005 10.0kb downstream 10.0kb downstream 16410 true Scaffold3030: 74510-90919 Capsella grandiflora
Cagra.3030s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3030: 74510-84509 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496512 5273 Angiosperm Singleton cluster - no MSA
122333473 5261 Brassicaceae Singleton cluster - no MSA
123774415 5264 Brassicales-Malvales Singleton cluster - no MSA
124272854 5266 SBM Singleton cluster - no MSA
124128597 5268 Malvidae Singleton cluster - no MSA
123857282 5270 Rosid Singleton cluster - no MSA
123443113 5271 Pentapetalae Singleton cluster - no MSA
122478682 5272 Eudicot Singleton cluster - no MSA
120769873 5274 Embryophyte Singleton cluster - no MSA
122812241 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain