Gene : Cagra.3060s0004 C. grandiflora v1.1
Genomic Order:  4 Name:  ? Cagra.3060s0004
Secondary Identifier:  ? PAC:28910619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3060s0004 0.5kb upstream 0.5kb upstream 8580 true Scaffold3060: 12126-20705 Capsella grandiflora
Cagra.3060s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3060: 20206-20705 Capsella grandiflora
Cagra.3060s0004 0.5kb downstream 0.5kb downstream 8580 true Scaffold3060: 11626-20205 Capsella grandiflora
Cagra.3060s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3060: 11626-12125 Capsella grandiflora
Cagra.3060s0004 1.0kb upstream 1.0kb upstream 9080 true Scaffold3060: 12126-21205 Capsella grandiflora
Cagra.3060s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3060: 20206-21205 Capsella grandiflora
Cagra.3060s0004 1.0kb downstream 1.0kb downstream 9080 true Scaffold3060: 11126-20205 Capsella grandiflora
Cagra.3060s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3060: 11126-12125 Capsella grandiflora
Cagra.3060s0004 2.0kb upstream 2.0kb upstream 10080 true Scaffold3060: 12126-22205 Capsella grandiflora
Cagra.3060s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3060: 20206-22205 Capsella grandiflora
Cagra.3060s0004 2.0kb downstream 2.0kb downstream 10080 true Scaffold3060: 10126-20205 Capsella grandiflora
Cagra.3060s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3060: 10126-12125 Capsella grandiflora
Cagra.3060s0004 5.0kb upstream 5.0kb upstream 13080 true Scaffold3060: 12126-25205 Capsella grandiflora
Cagra.3060s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3060: 20206-25205 Capsella grandiflora
Cagra.3060s0004 5.0kb downstream 5.0kb downstream 13080 true Scaffold3060: 7126-20205 Capsella grandiflora
Cagra.3060s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3060: 7126-12125 Capsella grandiflora
Cagra.3060s0004 10.0kb upstream 10.0kb upstream 18080 true Scaffold3060: 12126-30205 Capsella grandiflora
Cagra.3060s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3060: 20206-30205 Capsella grandiflora
Cagra.3060s0004 10.0kb downstream 10.0kb downstream 18080 true Scaffold3060: 2126-20205 Capsella grandiflora
Cagra.3060s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3060: 2126-12125 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371873 5261 Brassicaceae View MSA
123829539 5264 Brassicales-Malvales View MSA
124341127 5266 SBM View MSA
124236882 5268 Malvidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain