Gene : Cagra.3126s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24423:SF436 - HISTIDINE KINASE 1 Genomic Order:  15
Name:  ? Cagra.3126s0015 Secondary Identifier:  ? PAC:28902410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3126s0015 0.5kb upstream 0.5kb upstream 5731 true Scaffold3126: 54362-60092 Capsella grandiflora
Cagra.3126s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold3126: 59593-60092 Capsella grandiflora
Cagra.3126s0015 0.5kb downstream 0.5kb downstream 5731 true Scaffold3126: 53862-59592 Capsella grandiflora
Cagra.3126s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold3126: 53862-54361 Capsella grandiflora
Cagra.3126s0015 1.0kb upstream 1.0kb upstream 6231 true Scaffold3126: 54362-60592 Capsella grandiflora
Cagra.3126s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold3126: 59593-60592 Capsella grandiflora
Cagra.3126s0015 1.0kb downstream 1.0kb downstream 6231 true Scaffold3126: 53362-59592 Capsella grandiflora
Cagra.3126s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold3126: 53362-54361 Capsella grandiflora
Cagra.3126s0015 2.0kb upstream 2.0kb upstream 7231 true Scaffold3126: 54362-61592 Capsella grandiflora
Cagra.3126s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold3126: 59593-61592 Capsella grandiflora
Cagra.3126s0015 2.0kb downstream 2.0kb downstream 7231 true Scaffold3126: 52362-59592 Capsella grandiflora
Cagra.3126s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold3126: 52362-54361 Capsella grandiflora
Cagra.3126s0015 5.0kb upstream 5.0kb upstream 10231 true Scaffold3126: 54362-64592 Capsella grandiflora
Cagra.3126s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold3126: 59593-64592 Capsella grandiflora
Cagra.3126s0015 5.0kb downstream 5.0kb downstream 10231 true Scaffold3126: 49362-59592 Capsella grandiflora
Cagra.3126s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold3126: 49362-54361 Capsella grandiflora
Cagra.3126s0015 10.0kb upstream 10.0kb upstream 15231 true Scaffold3126: 54362-69592 Capsella grandiflora
Cagra.3126s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold3126: 59593-69592 Capsella grandiflora
Cagra.3126s0015 10.0kb downstream 10.0kb downstream 15231 true Scaffold3126: 44362-59592 Capsella grandiflora
Cagra.3126s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold3126: 44362-54361 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372320 5261 Brassicaceae View MSA
123838383 5264 Brassicales-Malvales View MSA
124337495 5266 SBM View MSA
124242279 5268 Malvidae View MSA
124061360 5270 Rosid View MSA
123743331 5271 Pentapetalae View MSA
122796792 5272 Eudicot View MSA
122048751 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121348111 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain