Gene : Cagra.3166s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Genomic Order:  2
Name:  ? Cagra.3166s0002 Secondary Identifier:  ? PAC:28899703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0002 0.5kb upstream 0.5kb upstream 5138 true Scaffold3166: 4858-9995 Capsella grandiflora
Cagra.3166s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 4858-5357 Capsella grandiflora
Cagra.3166s0002 0.5kb downstream 0.5kb downstream 5138 true Scaffold3166: 5358-10495 Capsella grandiflora
Cagra.3166s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 9996-10495 Capsella grandiflora
Cagra.3166s0002 1.0kb upstream 1.0kb upstream 5638 true Scaffold3166: 4358-9995 Capsella grandiflora
Cagra.3166s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 4358-5357 Capsella grandiflora
Cagra.3166s0002 1.0kb downstream 1.0kb downstream 5638 true Scaffold3166: 5358-10995 Capsella grandiflora
Cagra.3166s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 9996-10995 Capsella grandiflora
Cagra.3166s0002 2.0kb upstream 2.0kb upstream 6638 true Scaffold3166: 3358-9995 Capsella grandiflora
Cagra.3166s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 3358-5357 Capsella grandiflora
Cagra.3166s0002 2.0kb downstream 2.0kb downstream 6638 true Scaffold3166: 5358-11995 Capsella grandiflora
Cagra.3166s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 9996-11995 Capsella grandiflora
Cagra.3166s0002 5.0kb upstream 5.0kb upstream 9638 true Scaffold3166: 358-9995 Capsella grandiflora
Cagra.3166s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 358-5357 Capsella grandiflora
Cagra.3166s0002 5.0kb downstream 5.0kb downstream 9638 true Scaffold3166: 5358-14995 Capsella grandiflora
Cagra.3166s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 9996-14995 Capsella grandiflora
Cagra.3166s0002 10.0kb upstream 10.0kb upstream 9995 true Scaffold3166: 1-9995 Capsella grandiflora
Cagra.3166s0002 10.0kb upstream 10.0kb upstream 5357 false Scaffold3166: 1-5357 Capsella grandiflora
Cagra.3166s0002 10.0kb downstream 10.0kb downstream 14638 true Scaffold3166: 5358-19995 Capsella grandiflora
Cagra.3166s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 9996-19995 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369066 5261 Brassicaceae View MSA
123831475 5264 Brassicales-Malvales View MSA
124321729 5266 SBM View MSA
124243939 5268 Malvidae View MSA
124061066 5270 Rosid View MSA
123739122 5271 Pentapetalae View MSA
122795535 5272 Eudicot View MSA
122050762 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain