Gene : Cagra.3166s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  31
Name:  ? Cagra.3166s0031 Secondary Identifier:  ? PAC:28899748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0031 0.5kb upstream 0.5kb upstream 2130 true Scaffold3166: 101852-103981 Capsella grandiflora
Cagra.3166s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 103482-103981 Capsella grandiflora
Cagra.3166s0031 0.5kb downstream 0.5kb downstream 2130 true Scaffold3166: 101352-103481 Capsella grandiflora
Cagra.3166s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 101352-101851 Capsella grandiflora
Cagra.3166s0031 1.0kb upstream 1.0kb upstream 2630 true Scaffold3166: 101852-104481 Capsella grandiflora
Cagra.3166s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 103482-104481 Capsella grandiflora
Cagra.3166s0031 1.0kb downstream 1.0kb downstream 2630 true Scaffold3166: 100852-103481 Capsella grandiflora
Cagra.3166s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 100852-101851 Capsella grandiflora
Cagra.3166s0031 2.0kb upstream 2.0kb upstream 3630 true Scaffold3166: 101852-105481 Capsella grandiflora
Cagra.3166s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 103482-105481 Capsella grandiflora
Cagra.3166s0031 2.0kb downstream 2.0kb downstream 3630 true Scaffold3166: 99852-103481 Capsella grandiflora
Cagra.3166s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 99852-101851 Capsella grandiflora
Cagra.3166s0031 5.0kb upstream 5.0kb upstream 6630 true Scaffold3166: 101852-108481 Capsella grandiflora
Cagra.3166s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 103482-108481 Capsella grandiflora
Cagra.3166s0031 5.0kb downstream 5.0kb downstream 6630 true Scaffold3166: 96852-103481 Capsella grandiflora
Cagra.3166s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 96852-101851 Capsella grandiflora
Cagra.3166s0031 10.0kb upstream 10.0kb upstream 11630 true Scaffold3166: 101852-113481 Capsella grandiflora
Cagra.3166s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold3166: 103482-113481 Capsella grandiflora
Cagra.3166s0031 10.0kb downstream 10.0kb downstream 11630 true Scaffold3166: 91852-103481 Capsella grandiflora
Cagra.3166s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 91852-101851 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380102 5261 Brassicaceae View MSA
123836344 5264 Brassicales-Malvales View MSA
124345439 5266 SBM View MSA
124239589 5268 Malvidae View MSA
124063753 5270 Rosid View MSA
123741848 5271 Pentapetalae View MSA
122790335 5272 Eudicot View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain