Gene : Cagra.3166s0055 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11122:SF21 - ALDOSE 1-EPIMERASE FAMILY PROTEIN-RELATED Genomic Order:  55
Name:  ? Cagra.3166s0055 Secondary Identifier:  ? PAC:28899756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0055 0.5kb upstream 0.5kb upstream 3598 true Scaffold3166: 180930-184527 Capsella grandiflora
Cagra.3166s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 184028-184527 Capsella grandiflora
Cagra.3166s0055 0.5kb downstream 0.5kb downstream 3598 true Scaffold3166: 180430-184027 Capsella grandiflora
Cagra.3166s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 180430-180929 Capsella grandiflora
Cagra.3166s0055 1.0kb upstream 1.0kb upstream 4098 true Scaffold3166: 180930-185027 Capsella grandiflora
Cagra.3166s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 184028-185027 Capsella grandiflora
Cagra.3166s0055 1.0kb downstream 1.0kb downstream 4098 true Scaffold3166: 179930-184027 Capsella grandiflora
Cagra.3166s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 179930-180929 Capsella grandiflora
Cagra.3166s0055 2.0kb upstream 2.0kb upstream 5098 true Scaffold3166: 180930-186027 Capsella grandiflora
Cagra.3166s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 184028-186027 Capsella grandiflora
Cagra.3166s0055 2.0kb downstream 2.0kb downstream 5098 true Scaffold3166: 178930-184027 Capsella grandiflora
Cagra.3166s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 178930-180929 Capsella grandiflora
Cagra.3166s0055 5.0kb upstream 5.0kb upstream 8098 true Scaffold3166: 180930-189027 Capsella grandiflora
Cagra.3166s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 184028-189027 Capsella grandiflora
Cagra.3166s0055 5.0kb downstream 5.0kb downstream 8098 true Scaffold3166: 175930-184027 Capsella grandiflora
Cagra.3166s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 175930-180929 Capsella grandiflora
Cagra.3166s0055 10.0kb upstream 10.0kb upstream 13098 true Scaffold3166: 180930-194027 Capsella grandiflora
Cagra.3166s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold3166: 184028-194027 Capsella grandiflora
Cagra.3166s0055 10.0kb downstream 10.0kb downstream 13098 true Scaffold3166: 170930-184027 Capsella grandiflora
Cagra.3166s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 170930-180929 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365074 5261 Brassicaceae View MSA
123838276 5264 Brassicales-Malvales View MSA
124345395 5266 SBM View MSA
124238410 5268 Malvidae View MSA
124066118 5270 Rosid View MSA
123736939 5271 Pentapetalae View MSA
122788781 5272 Eudicot View MSA
122046628 5273 Angiosperm View MSA
121310634 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain