Gene : Cagra.2969s0013 C. grandiflora v1.1
Defline:  (1 of 4) PTHR12411:SF344 - CYSTEINE PROTEASE COMPONENT OF PROTEASE-INHIBITOR COMPLEX-RELATED Genomic Order:  13
Name:  ? Cagra.2969s0013 Secondary Identifier:  ? PAC:28909873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2969s0013 0.5kb upstream 0.5kb upstream 3021 true Scaffold2969: 59544-62564 Capsella grandiflora
Cagra.2969s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold2969: 59544-60043 Capsella grandiflora
Cagra.2969s0013 0.5kb downstream 0.5kb downstream 3021 true Scaffold2969: 60044-63064 Capsella grandiflora
Cagra.2969s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold2969: 62565-63064 Capsella grandiflora
Cagra.2969s0013 1.0kb upstream 1.0kb upstream 3521 true Scaffold2969: 59044-62564 Capsella grandiflora
Cagra.2969s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold2969: 59044-60043 Capsella grandiflora
Cagra.2969s0013 1.0kb downstream 1.0kb downstream 3521 true Scaffold2969: 60044-63564 Capsella grandiflora
Cagra.2969s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold2969: 62565-63564 Capsella grandiflora
Cagra.2969s0013 2.0kb upstream 2.0kb upstream 4521 true Scaffold2969: 58044-62564 Capsella grandiflora
Cagra.2969s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold2969: 58044-60043 Capsella grandiflora
Cagra.2969s0013 2.0kb downstream 2.0kb downstream 4521 true Scaffold2969: 60044-64564 Capsella grandiflora
Cagra.2969s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold2969: 62565-64564 Capsella grandiflora
Cagra.2969s0013 5.0kb upstream 5.0kb upstream 7521 true Scaffold2969: 55044-62564 Capsella grandiflora
Cagra.2969s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold2969: 55044-60043 Capsella grandiflora
Cagra.2969s0013 5.0kb downstream 5.0kb downstream 7521 true Scaffold2969: 60044-67564 Capsella grandiflora
Cagra.2969s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold2969: 62565-67564 Capsella grandiflora
Cagra.2969s0013 10.0kb upstream 10.0kb upstream 12521 true Scaffold2969: 50044-62564 Capsella grandiflora
Cagra.2969s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold2969: 50044-60043 Capsella grandiflora
Cagra.2969s0013 10.0kb downstream 10.0kb downstream 12521 true Scaffold2969: 60044-72564 Capsella grandiflora
Cagra.2969s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold2969: 62565-72564 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361020 5261 Brassicaceae View MSA
123798084 5264 Brassicales-Malvales View MSA
124295762 5266 SBM View MSA
124247983 5268 Malvidae View MSA
124071516 5270 Rosid View MSA
123751389 5271 Pentapetalae View MSA
122796567 5272 Eudicot View MSA
122043914 5273 Angiosperm View MSA
123428950 5275 Viridiplantae View MSA
121348634 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain