Gene : Cagra.2991s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  3
Name:  ? Cagra.2991s0003 Secondary Identifier:  ? PAC:28900204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0003 0.5kb upstream 0.5kb upstream 2442 true Scaffold2991: 12477-14918 Capsella grandiflora
Cagra.2991s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 12477-12976 Capsella grandiflora
Cagra.2991s0003 0.5kb downstream 0.5kb downstream 2442 true Scaffold2991: 12977-15418 Capsella grandiflora
Cagra.2991s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 14919-15418 Capsella grandiflora
Cagra.2991s0003 1.0kb upstream 1.0kb upstream 2942 true Scaffold2991: 11977-14918 Capsella grandiflora
Cagra.2991s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 11977-12976 Capsella grandiflora
Cagra.2991s0003 1.0kb downstream 1.0kb downstream 2942 true Scaffold2991: 12977-15918 Capsella grandiflora
Cagra.2991s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 14919-15918 Capsella grandiflora
Cagra.2991s0003 2.0kb upstream 2.0kb upstream 3942 true Scaffold2991: 10977-14918 Capsella grandiflora
Cagra.2991s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 10977-12976 Capsella grandiflora
Cagra.2991s0003 2.0kb downstream 2.0kb downstream 3942 true Scaffold2991: 12977-16918 Capsella grandiflora
Cagra.2991s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 14919-16918 Capsella grandiflora
Cagra.2991s0003 5.0kb upstream 5.0kb upstream 6942 true Scaffold2991: 7977-14918 Capsella grandiflora
Cagra.2991s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 7977-12976 Capsella grandiflora
Cagra.2991s0003 5.0kb downstream 5.0kb downstream 6942 true Scaffold2991: 12977-19918 Capsella grandiflora
Cagra.2991s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 14919-19918 Capsella grandiflora
Cagra.2991s0003 10.0kb upstream 10.0kb upstream 11942 true Scaffold2991: 2977-14918 Capsella grandiflora
Cagra.2991s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 2977-12976 Capsella grandiflora
Cagra.2991s0003 10.0kb downstream 10.0kb downstream 11942 true Scaffold2991: 12977-24918 Capsella grandiflora
Cagra.2991s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 14919-24918 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364329 5261 Brassicaceae View MSA
123831905 5264 Brassicales-Malvales View MSA
124346866 5266 SBM View MSA
124253408 5268 Malvidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain