Gene : Cagra.2991s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11208//PTHR11208:SF59 - RNA-BINDING PROTEIN RELATED Genomic Order:  30
Name:  ? Cagra.2991s0030 Secondary Identifier:  ? PAC:28900202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0030 0.5kb upstream 0.5kb upstream 3550 true Scaffold2991: 102011-105560 Capsella grandiflora
Cagra.2991s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 105061-105560 Capsella grandiflora
Cagra.2991s0030 0.5kb downstream 0.5kb downstream 3550 true Scaffold2991: 101511-105060 Capsella grandiflora
Cagra.2991s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 101511-102010 Capsella grandiflora
Cagra.2991s0030 1.0kb upstream 1.0kb upstream 4050 true Scaffold2991: 102011-106060 Capsella grandiflora
Cagra.2991s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 105061-106060 Capsella grandiflora
Cagra.2991s0030 1.0kb downstream 1.0kb downstream 4050 true Scaffold2991: 101011-105060 Capsella grandiflora
Cagra.2991s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 101011-102010 Capsella grandiflora
Cagra.2991s0030 2.0kb upstream 2.0kb upstream 5050 true Scaffold2991: 102011-107060 Capsella grandiflora
Cagra.2991s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 105061-107060 Capsella grandiflora
Cagra.2991s0030 2.0kb downstream 2.0kb downstream 5050 true Scaffold2991: 100011-105060 Capsella grandiflora
Cagra.2991s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 100011-102010 Capsella grandiflora
Cagra.2991s0030 5.0kb upstream 5.0kb upstream 8050 true Scaffold2991: 102011-110060 Capsella grandiflora
Cagra.2991s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 105061-110060 Capsella grandiflora
Cagra.2991s0030 5.0kb downstream 5.0kb downstream 8050 true Scaffold2991: 97011-105060 Capsella grandiflora
Cagra.2991s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 97011-102010 Capsella grandiflora
Cagra.2991s0030 10.0kb upstream 10.0kb upstream 13050 true Scaffold2991: 102011-115060 Capsella grandiflora
Cagra.2991s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 105061-115060 Capsella grandiflora
Cagra.2991s0030 10.0kb downstream 10.0kb downstream 13050 true Scaffold2991: 92011-105060 Capsella grandiflora
Cagra.2991s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 92011-102010 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370714 5261 Brassicaceae View MSA
123836230 5264 Brassicales-Malvales View MSA
124337389 5266 SBM View MSA
124240023 5268 Malvidae View MSA
124074646 5270 Rosid View MSA
123752463 5271 Pentapetalae View MSA
122791052 5272 Eudicot View MSA
122045750 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain