Gene : Cagra.2991s0038 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10336:SF92 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 2-RELATED Genomic Order:  38
Name:  ? Cagra.2991s0038 Secondary Identifier:  ? PAC:28900235
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6367 Capsella grandiflora pathologic  
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0038 0.5kb upstream 0.5kb upstream 3974 true Scaffold2991: 135834-139807 Capsella grandiflora
Cagra.2991s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 135834-136333 Capsella grandiflora
Cagra.2991s0038 0.5kb downstream 0.5kb downstream 3974 true Scaffold2991: 136334-140307 Capsella grandiflora
Cagra.2991s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 139808-140307 Capsella grandiflora
Cagra.2991s0038 1.0kb upstream 1.0kb upstream 4474 true Scaffold2991: 135334-139807 Capsella grandiflora
Cagra.2991s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 135334-136333 Capsella grandiflora
Cagra.2991s0038 1.0kb downstream 1.0kb downstream 4474 true Scaffold2991: 136334-140807 Capsella grandiflora
Cagra.2991s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 139808-140807 Capsella grandiflora
Cagra.2991s0038 2.0kb upstream 2.0kb upstream 5474 true Scaffold2991: 134334-139807 Capsella grandiflora
Cagra.2991s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 134334-136333 Capsella grandiflora
Cagra.2991s0038 2.0kb downstream 2.0kb downstream 5474 true Scaffold2991: 136334-141807 Capsella grandiflora
Cagra.2991s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 139808-141807 Capsella grandiflora
Cagra.2991s0038 5.0kb upstream 5.0kb upstream 8474 true Scaffold2991: 131334-139807 Capsella grandiflora
Cagra.2991s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 131334-136333 Capsella grandiflora
Cagra.2991s0038 5.0kb downstream 5.0kb downstream 8474 true Scaffold2991: 136334-144807 Capsella grandiflora
Cagra.2991s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 139808-144807 Capsella grandiflora
Cagra.2991s0038 10.0kb upstream 10.0kb upstream 13474 true Scaffold2991: 126334-139807 Capsella grandiflora
Cagra.2991s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 126334-136333 Capsella grandiflora
Cagra.2991s0038 10.0kb downstream 10.0kb downstream 13474 true Scaffold2991: 136334-149807 Capsella grandiflora
Cagra.2991s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 139808-149807 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376253 5261 Brassicaceae View MSA
123827505 5264 Brassicales-Malvales View MSA
124337245 5266 SBM View MSA
124244278 5268 Malvidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain