Gene : Cagra.2991s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF156 - MATE EFFLUX FAMILY PROTEIN FRD3 Genomic Order:  43
Name:  ? Cagra.2991s0043 Secondary Identifier:  ? PAC:28900232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0043 0.5kb upstream 0.5kb upstream 3853 true Scaffold2991: 153096-156948 Capsella grandiflora
Cagra.2991s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 153096-153595 Capsella grandiflora
Cagra.2991s0043 0.5kb downstream 0.5kb downstream 3853 true Scaffold2991: 153596-157448 Capsella grandiflora
Cagra.2991s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 156949-157448 Capsella grandiflora
Cagra.2991s0043 1.0kb upstream 1.0kb upstream 4353 true Scaffold2991: 152596-156948 Capsella grandiflora
Cagra.2991s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 152596-153595 Capsella grandiflora
Cagra.2991s0043 1.0kb downstream 1.0kb downstream 4353 true Scaffold2991: 153596-157948 Capsella grandiflora
Cagra.2991s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 156949-157948 Capsella grandiflora
Cagra.2991s0043 2.0kb upstream 2.0kb upstream 5353 true Scaffold2991: 151596-156948 Capsella grandiflora
Cagra.2991s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 151596-153595 Capsella grandiflora
Cagra.2991s0043 2.0kb downstream 2.0kb downstream 5353 true Scaffold2991: 153596-158948 Capsella grandiflora
Cagra.2991s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 156949-158948 Capsella grandiflora
Cagra.2991s0043 5.0kb upstream 5.0kb upstream 8353 true Scaffold2991: 148596-156948 Capsella grandiflora
Cagra.2991s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 148596-153595 Capsella grandiflora
Cagra.2991s0043 5.0kb downstream 5.0kb downstream 8353 true Scaffold2991: 153596-161948 Capsella grandiflora
Cagra.2991s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 156949-161948 Capsella grandiflora
Cagra.2991s0043 10.0kb upstream 10.0kb upstream 13353 true Scaffold2991: 143596-156948 Capsella grandiflora
Cagra.2991s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 143596-153595 Capsella grandiflora
Cagra.2991s0043 10.0kb downstream 10.0kb downstream 13353 true Scaffold2991: 153596-166948 Capsella grandiflora
Cagra.2991s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 156949-166948 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379970 5261 Brassicaceae View MSA
123840148 5264 Brassicales-Malvales View MSA
124322685 5266 SBM View MSA
124237735 5268 Malvidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain