Gene : Cagra.2991s0051 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Genomic Order:  51
Name:  ? Cagra.2991s0051 Secondary Identifier:  ? PAC:28900203
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0051 0.5kb upstream 0.5kb upstream 4058 true Scaffold2991: 187710-191767 Capsella grandiflora
Cagra.2991s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 191268-191767 Capsella grandiflora
Cagra.2991s0051 0.5kb downstream 0.5kb downstream 4058 true Scaffold2991: 187210-191267 Capsella grandiflora
Cagra.2991s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 187210-187709 Capsella grandiflora
Cagra.2991s0051 1.0kb upstream 1.0kb upstream 4558 true Scaffold2991: 187710-192267 Capsella grandiflora
Cagra.2991s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 191268-192267 Capsella grandiflora
Cagra.2991s0051 1.0kb downstream 1.0kb downstream 4558 true Scaffold2991: 186710-191267 Capsella grandiflora
Cagra.2991s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 186710-187709 Capsella grandiflora
Cagra.2991s0051 2.0kb upstream 2.0kb upstream 5558 true Scaffold2991: 187710-193267 Capsella grandiflora
Cagra.2991s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 191268-193267 Capsella grandiflora
Cagra.2991s0051 2.0kb downstream 2.0kb downstream 5558 true Scaffold2991: 185710-191267 Capsella grandiflora
Cagra.2991s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 185710-187709 Capsella grandiflora
Cagra.2991s0051 5.0kb upstream 5.0kb upstream 8558 true Scaffold2991: 187710-196267 Capsella grandiflora
Cagra.2991s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 191268-196267 Capsella grandiflora
Cagra.2991s0051 5.0kb downstream 5.0kb downstream 8558 true Scaffold2991: 182710-191267 Capsella grandiflora
Cagra.2991s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 182710-187709 Capsella grandiflora
Cagra.2991s0051 10.0kb upstream 10.0kb upstream 13558 true Scaffold2991: 187710-201267 Capsella grandiflora
Cagra.2991s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 191268-201267 Capsella grandiflora
Cagra.2991s0051 10.0kb downstream 10.0kb downstream 13558 true Scaffold2991: 177710-191267 Capsella grandiflora
Cagra.2991s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 177710-187709 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362710 5261 Brassicaceae View MSA
123835187 5264 Brassicales-Malvales View MSA
124337249 5266 SBM View MSA
124238892 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain