Gene : Cagra.3001s0002 C. grandiflora v1.1
Genomic Order:  2 Name:  ? Cagra.3001s0002
Secondary Identifier:  ? PAC:28894656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3001s0002 0.5kb upstream 0.5kb upstream 1966 true Scaffold3001: 1835-3800 Capsella grandiflora
Cagra.3001s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3001: 3301-3800 Capsella grandiflora
Cagra.3001s0002 0.5kb downstream 0.5kb downstream 1966 true Scaffold3001: 1335-3300 Capsella grandiflora
Cagra.3001s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3001: 1335-1834 Capsella grandiflora
Cagra.3001s0002 1.0kb upstream 1.0kb upstream 2466 true Scaffold3001: 1835-4300 Capsella grandiflora
Cagra.3001s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3001: 3301-4300 Capsella grandiflora
Cagra.3001s0002 1.0kb downstream 1.0kb downstream 2466 true Scaffold3001: 835-3300 Capsella grandiflora
Cagra.3001s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3001: 835-1834 Capsella grandiflora
Cagra.3001s0002 2.0kb upstream 2.0kb upstream 3466 true Scaffold3001: 1835-5300 Capsella grandiflora
Cagra.3001s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3001: 3301-5300 Capsella grandiflora
Cagra.3001s0002 2.0kb downstream 2.0kb downstream 3300 true Scaffold3001: 1-3300 Capsella grandiflora
Cagra.3001s0002 2.0kb downstream 2.0kb downstream 1834 false Scaffold3001: 1-1834 Capsella grandiflora
Cagra.3001s0002 5.0kb upstream 5.0kb upstream 6018 true Scaffold3001: 1835-7852 Capsella grandiflora
Cagra.3001s0002 5.0kb upstream 5.0kb upstream 4552 false Scaffold3001: 3301-7852 Capsella grandiflora
Cagra.3001s0002 5.0kb downstream 5.0kb downstream 3300 true Scaffold3001: 1-3300 Capsella grandiflora
Cagra.3001s0002 5.0kb downstream 5.0kb downstream 1834 false Scaffold3001: 1-1834 Capsella grandiflora
Cagra.3001s0002 10.0kb upstream 10.0kb upstream 6018 true Scaffold3001: 1835-7852 Capsella grandiflora
Cagra.3001s0002 10.0kb upstream 10.0kb upstream 4552 false Scaffold3001: 3301-7852 Capsella grandiflora
Cagra.3001s0002 10.0kb downstream 10.0kb downstream 3300 true Scaffold3001: 1-3300 Capsella grandiflora
Cagra.3001s0002 10.0kb downstream 10.0kb downstream 1834 false Scaffold3001: 1-1834 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122343375 5261 Brassicaceae View MSA
123832702 5264 Brassicales-Malvales View MSA
124341700 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain