Gene : Cagra.3706s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13952:SF6 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN Genomic Order:  23
Name:  ? Cagra.3706s0023 Secondary Identifier:  ? PAC:28901133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0023 0.5kb upstream 0.5kb upstream 2542 true Scaffold3706: 90542-93083 Capsella grandiflora
Cagra.3706s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 90542-91041 Capsella grandiflora
Cagra.3706s0023 0.5kb downstream 0.5kb downstream 2542 true Scaffold3706: 91042-93583 Capsella grandiflora
Cagra.3706s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 93084-93583 Capsella grandiflora
Cagra.3706s0023 1.0kb upstream 1.0kb upstream 3042 true Scaffold3706: 90042-93083 Capsella grandiflora
Cagra.3706s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 90042-91041 Capsella grandiflora
Cagra.3706s0023 1.0kb downstream 1.0kb downstream 3042 true Scaffold3706: 91042-94083 Capsella grandiflora
Cagra.3706s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 93084-94083 Capsella grandiflora
Cagra.3706s0023 2.0kb upstream 2.0kb upstream 4042 true Scaffold3706: 89042-93083 Capsella grandiflora
Cagra.3706s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 89042-91041 Capsella grandiflora
Cagra.3706s0023 2.0kb downstream 2.0kb downstream 4042 true Scaffold3706: 91042-95083 Capsella grandiflora
Cagra.3706s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 93084-95083 Capsella grandiflora
Cagra.3706s0023 5.0kb upstream 5.0kb upstream 7042 true Scaffold3706: 86042-93083 Capsella grandiflora
Cagra.3706s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 86042-91041 Capsella grandiflora
Cagra.3706s0023 5.0kb downstream 5.0kb downstream 7042 true Scaffold3706: 91042-98083 Capsella grandiflora
Cagra.3706s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 93084-98083 Capsella grandiflora
Cagra.3706s0023 10.0kb upstream 10.0kb upstream 12042 true Scaffold3706: 81042-93083 Capsella grandiflora
Cagra.3706s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 81042-91041 Capsella grandiflora
Cagra.3706s0023 10.0kb downstream 10.0kb downstream 12042 true Scaffold3706: 91042-103083 Capsella grandiflora
Cagra.3706s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 93084-103083 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369028 5261 Brassicaceae View MSA
123833161 5264 Brassicales-Malvales View MSA
124339746 5266 SBM View MSA
124240814 5268 Malvidae View MSA
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain