Gene : Cagra.3706s0022 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22976 - BIOTIN SYNTHASE Genomic Order:  22
Name:  ? Cagra.3706s0022 Secondary Identifier:  ? PAC:28901077
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1507 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0022 0.5kb upstream 0.5kb upstream 3064 true Scaffold3706: 88247-91310 Capsella grandiflora
Cagra.3706s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 90811-91310 Capsella grandiflora
Cagra.3706s0022 0.5kb downstream 0.5kb downstream 3064 true Scaffold3706: 87747-90810 Capsella grandiflora
Cagra.3706s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 87747-88246 Capsella grandiflora
Cagra.3706s0022 1.0kb upstream 1.0kb upstream 3564 true Scaffold3706: 88247-91810 Capsella grandiflora
Cagra.3706s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 90811-91810 Capsella grandiflora
Cagra.3706s0022 1.0kb downstream 1.0kb downstream 3564 true Scaffold3706: 87247-90810 Capsella grandiflora
Cagra.3706s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 87247-88246 Capsella grandiflora
Cagra.3706s0022 2.0kb upstream 2.0kb upstream 4564 true Scaffold3706: 88247-92810 Capsella grandiflora
Cagra.3706s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 90811-92810 Capsella grandiflora
Cagra.3706s0022 2.0kb downstream 2.0kb downstream 4564 true Scaffold3706: 86247-90810 Capsella grandiflora
Cagra.3706s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 86247-88246 Capsella grandiflora
Cagra.3706s0022 5.0kb upstream 5.0kb upstream 7564 true Scaffold3706: 88247-95810 Capsella grandiflora
Cagra.3706s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 90811-95810 Capsella grandiflora
Cagra.3706s0022 5.0kb downstream 5.0kb downstream 7564 true Scaffold3706: 83247-90810 Capsella grandiflora
Cagra.3706s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 83247-88246 Capsella grandiflora
Cagra.3706s0022 10.0kb upstream 10.0kb upstream 12564 true Scaffold3706: 88247-100810 Capsella grandiflora
Cagra.3706s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 90811-100810 Capsella grandiflora
Cagra.3706s0022 10.0kb downstream 10.0kb downstream 12564 true Scaffold3706: 78247-90810 Capsella grandiflora
Cagra.3706s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 78247-88246 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362825 5261 Brassicaceae View MSA
123834542 5264 Brassicales-Malvales View MSA
124350234 5266 SBM View MSA
124240985 5268 Malvidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain