Gene : Cagra.3706s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10965 - 60S RIBOSOMAL PROTEIN L38 Genomic Order:  30
Name:  ? Cagra.3706s0030 Secondary Identifier:  ? PAC:28901080
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0030 0.5kb upstream 0.5kb upstream 1750 true Scaffold3706: 117475-119224 Capsella grandiflora
Cagra.3706s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 118725-119224 Capsella grandiflora
Cagra.3706s0030 0.5kb downstream 0.5kb downstream 1750 true Scaffold3706: 116975-118724 Capsella grandiflora
Cagra.3706s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 116975-117474 Capsella grandiflora
Cagra.3706s0030 1.0kb upstream 1.0kb upstream 2250 true Scaffold3706: 117475-119724 Capsella grandiflora
Cagra.3706s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 118725-119724 Capsella grandiflora
Cagra.3706s0030 1.0kb downstream 1.0kb downstream 2250 true Scaffold3706: 116475-118724 Capsella grandiflora
Cagra.3706s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 116475-117474 Capsella grandiflora
Cagra.3706s0030 2.0kb upstream 2.0kb upstream 3250 true Scaffold3706: 117475-120724 Capsella grandiflora
Cagra.3706s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 118725-120724 Capsella grandiflora
Cagra.3706s0030 2.0kb downstream 2.0kb downstream 3250 true Scaffold3706: 115475-118724 Capsella grandiflora
Cagra.3706s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 115475-117474 Capsella grandiflora
Cagra.3706s0030 5.0kb upstream 5.0kb upstream 6250 true Scaffold3706: 117475-123724 Capsella grandiflora
Cagra.3706s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 118725-123724 Capsella grandiflora
Cagra.3706s0030 5.0kb downstream 5.0kb downstream 6250 true Scaffold3706: 112475-118724 Capsella grandiflora
Cagra.3706s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 112475-117474 Capsella grandiflora
Cagra.3706s0030 10.0kb upstream 10.0kb upstream 11250 true Scaffold3706: 117475-128724 Capsella grandiflora
Cagra.3706s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 118725-128724 Capsella grandiflora
Cagra.3706s0030 10.0kb downstream 10.0kb downstream 11250 true Scaffold3706: 107475-118724 Capsella grandiflora
Cagra.3706s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 107475-117474 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029666 5273 Angiosperm View MSA
122380033 5261 Brassicaceae View MSA
123839814 5264 Brassicales-Malvales View MSA
124350744 5266 SBM View MSA
124254089 5268 Malvidae View MSA
124074373 5270 Rosid View MSA
123750152 5271 Pentapetalae View MSA
122794948 5272 Eudicot View MSA
121351263 5274 Embryophyte View MSA
123428665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain