Gene : Cagra.3706s0050 C. grandiflora v1.1
Defline:  (1 of 18) 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase Genomic Order:  50
Name:  ? Cagra.3706s0050 Secondary Identifier:  ? PAC:28901139
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6902 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0050 0.5kb upstream 0.5kb upstream 1645 true Scaffold3706: 178309-179953 Capsella grandiflora
Cagra.3706s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 179454-179953 Capsella grandiflora
Cagra.3706s0050 0.5kb downstream 0.5kb downstream 1645 true Scaffold3706: 177809-179453 Capsella grandiflora
Cagra.3706s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 177809-178308 Capsella grandiflora
Cagra.3706s0050 1.0kb upstream 1.0kb upstream 2145 true Scaffold3706: 178309-180453 Capsella grandiflora
Cagra.3706s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 179454-180453 Capsella grandiflora
Cagra.3706s0050 1.0kb downstream 1.0kb downstream 2145 true Scaffold3706: 177309-179453 Capsella grandiflora
Cagra.3706s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 177309-178308 Capsella grandiflora
Cagra.3706s0050 2.0kb upstream 2.0kb upstream 3145 true Scaffold3706: 178309-181453 Capsella grandiflora
Cagra.3706s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 179454-181453 Capsella grandiflora
Cagra.3706s0050 2.0kb downstream 2.0kb downstream 3145 true Scaffold3706: 176309-179453 Capsella grandiflora
Cagra.3706s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 176309-178308 Capsella grandiflora
Cagra.3706s0050 5.0kb upstream 5.0kb upstream 6145 true Scaffold3706: 178309-184453 Capsella grandiflora
Cagra.3706s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 179454-184453 Capsella grandiflora
Cagra.3706s0050 5.0kb downstream 5.0kb downstream 6145 true Scaffold3706: 173309-179453 Capsella grandiflora
Cagra.3706s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 173309-178308 Capsella grandiflora
Cagra.3706s0050 10.0kb upstream 10.0kb upstream 11145 true Scaffold3706: 178309-189453 Capsella grandiflora
Cagra.3706s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 179454-189453 Capsella grandiflora
Cagra.3706s0050 10.0kb downstream 10.0kb downstream 11145 true Scaffold3706: 168309-179453 Capsella grandiflora
Cagra.3706s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 168309-178308 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122370727 5261 Brassicaceae View MSA
123800030 5264 Brassicales-Malvales View MSA
124297491 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain