Gene : Cagra.3706s0054 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13237:SF8 - SOMETHING ABOUT SILENCING PROTEIN 10 Genomic Order:  54
Name:  ? Cagra.3706s0054 Secondary Identifier:  ? PAC:28901078
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0054 0.5kb upstream 0.5kb upstream 4613 true Scaffold3706: 187497-192109 Capsella grandiflora
Cagra.3706s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 187497-187996 Capsella grandiflora
Cagra.3706s0054 0.5kb downstream 0.5kb downstream 4613 true Scaffold3706: 187997-192609 Capsella grandiflora
Cagra.3706s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 192110-192609 Capsella grandiflora
Cagra.3706s0054 1.0kb upstream 1.0kb upstream 5113 true Scaffold3706: 186997-192109 Capsella grandiflora
Cagra.3706s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 186997-187996 Capsella grandiflora
Cagra.3706s0054 1.0kb downstream 1.0kb downstream 5113 true Scaffold3706: 187997-193109 Capsella grandiflora
Cagra.3706s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 192110-193109 Capsella grandiflora
Cagra.3706s0054 2.0kb upstream 2.0kb upstream 6113 true Scaffold3706: 185997-192109 Capsella grandiflora
Cagra.3706s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 185997-187996 Capsella grandiflora
Cagra.3706s0054 2.0kb downstream 2.0kb downstream 6113 true Scaffold3706: 187997-194109 Capsella grandiflora
Cagra.3706s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 192110-194109 Capsella grandiflora
Cagra.3706s0054 5.0kb upstream 5.0kb upstream 9113 true Scaffold3706: 182997-192109 Capsella grandiflora
Cagra.3706s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 182997-187996 Capsella grandiflora
Cagra.3706s0054 5.0kb downstream 5.0kb downstream 9113 true Scaffold3706: 187997-197109 Capsella grandiflora
Cagra.3706s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 192110-197109 Capsella grandiflora
Cagra.3706s0054 10.0kb upstream 10.0kb upstream 14113 true Scaffold3706: 177997-192109 Capsella grandiflora
Cagra.3706s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 177997-187996 Capsella grandiflora
Cagra.3706s0054 10.0kb downstream 10.0kb downstream 14113 true Scaffold3706: 187997-202109 Capsella grandiflora
Cagra.3706s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 192110-202109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122369974 5261 Brassicaceae View MSA
123829267 5264 Brassicales-Malvales View MSA
124338198 5266 SBM View MSA
124243762 5268 Malvidae View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain