Gene : Cagra.3706s0055 C. grandiflora v1.1
Defline:  (1 of 7) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  55
Name:  ? Cagra.3706s0055 Secondary Identifier:  ? PAC:28901094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0055 0.5kb upstream 0.5kb upstream 1106 true Scaffold3706: 192163-193268 Capsella grandiflora
Cagra.3706s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 192163-192662 Capsella grandiflora
Cagra.3706s0055 0.5kb downstream 0.5kb downstream 1106 true Scaffold3706: 192663-193768 Capsella grandiflora
Cagra.3706s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 193269-193768 Capsella grandiflora
Cagra.3706s0055 1.0kb upstream 1.0kb upstream 1606 true Scaffold3706: 191663-193268 Capsella grandiflora
Cagra.3706s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 191663-192662 Capsella grandiflora
Cagra.3706s0055 1.0kb downstream 1.0kb downstream 1606 true Scaffold3706: 192663-194268 Capsella grandiflora
Cagra.3706s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 193269-194268 Capsella grandiflora
Cagra.3706s0055 2.0kb upstream 2.0kb upstream 2606 true Scaffold3706: 190663-193268 Capsella grandiflora
Cagra.3706s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 190663-192662 Capsella grandiflora
Cagra.3706s0055 2.0kb downstream 2.0kb downstream 2606 true Scaffold3706: 192663-195268 Capsella grandiflora
Cagra.3706s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 193269-195268 Capsella grandiflora
Cagra.3706s0055 5.0kb upstream 5.0kb upstream 5606 true Scaffold3706: 187663-193268 Capsella grandiflora
Cagra.3706s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 187663-192662 Capsella grandiflora
Cagra.3706s0055 5.0kb downstream 5.0kb downstream 5606 true Scaffold3706: 192663-198268 Capsella grandiflora
Cagra.3706s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 193269-198268 Capsella grandiflora
Cagra.3706s0055 10.0kb upstream 10.0kb upstream 10606 true Scaffold3706: 182663-193268 Capsella grandiflora
Cagra.3706s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 182663-192662 Capsella grandiflora
Cagra.3706s0055 10.0kb downstream 10.0kb downstream 10606 true Scaffold3706: 192663-203268 Capsella grandiflora
Cagra.3706s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 193269-203268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380380 5261 Brassicaceae View MSA
123802686 5264 Brassicales-Malvales View MSA
124299859 5266 SBM View MSA
124151169 5268 Malvidae View MSA
124038019 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain