Gene : Cagra.3745s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11538//PTHR11538:SF42 - PHENYLALANYL-TRNA SYNTHETASE Genomic Order:  4
Name:  ? Cagra.3745s0004 Secondary Identifier:  ? PAC:28912990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3745s0004 0.5kb upstream 0.5kb upstream 1605 true Scaffold3745: 18539-20143 Capsella grandiflora
Cagra.3745s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3745: 18539-19038 Capsella grandiflora
Cagra.3745s0004 0.5kb downstream 0.5kb downstream 1605 true Scaffold3745: 19039-20643 Capsella grandiflora
Cagra.3745s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3745: 20144-20643 Capsella grandiflora
Cagra.3745s0004 1.0kb upstream 1.0kb upstream 2105 true Scaffold3745: 18039-20143 Capsella grandiflora
Cagra.3745s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3745: 18039-19038 Capsella grandiflora
Cagra.3745s0004 1.0kb downstream 1.0kb downstream 2105 true Scaffold3745: 19039-21143 Capsella grandiflora
Cagra.3745s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3745: 20144-21143 Capsella grandiflora
Cagra.3745s0004 2.0kb upstream 2.0kb upstream 3105 true Scaffold3745: 17039-20143 Capsella grandiflora
Cagra.3745s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3745: 17039-19038 Capsella grandiflora
Cagra.3745s0004 2.0kb downstream 2.0kb downstream 3105 true Scaffold3745: 19039-22143 Capsella grandiflora
Cagra.3745s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3745: 20144-22143 Capsella grandiflora
Cagra.3745s0004 5.0kb upstream 5.0kb upstream 6105 true Scaffold3745: 14039-20143 Capsella grandiflora
Cagra.3745s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3745: 14039-19038 Capsella grandiflora
Cagra.3745s0004 5.0kb downstream 5.0kb downstream 6105 true Scaffold3745: 19039-25143 Capsella grandiflora
Cagra.3745s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3745: 20144-25143 Capsella grandiflora
Cagra.3745s0004 10.0kb upstream 10.0kb upstream 11105 true Scaffold3745: 9039-20143 Capsella grandiflora
Cagra.3745s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3745: 9039-19038 Capsella grandiflora
Cagra.3745s0004 10.0kb downstream 10.0kb downstream 11105 true Scaffold3745: 19039-30143 Capsella grandiflora
Cagra.3745s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3745: 20144-30143 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
122361199 5261 Brassicaceae View MSA
123798117 5264 Brassicales-Malvales View MSA
124295793 5266 SBM View MSA
124250721 5268 Malvidae View MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain