Gene : Cagra.3744s0003 C. grandiflora v1.1
Defline:  (1 of 1) PF12796//PF13857//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) // Domain of unknown function (PGG) Genomic Order:  3
Name:  ? Cagra.3744s0003 Secondary Identifier:  ? PAC:28900834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3744s0003 0.5kb upstream 0.5kb upstream 2178 true Scaffold3744: 9294-11471 Capsella grandiflora
Cagra.3744s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3744: 10972-11471 Capsella grandiflora
Cagra.3744s0003 0.5kb downstream 0.5kb downstream 2178 true Scaffold3744: 8794-10971 Capsella grandiflora
Cagra.3744s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3744: 8794-9293 Capsella grandiflora
Cagra.3744s0003 1.0kb upstream 1.0kb upstream 2678 true Scaffold3744: 9294-11971 Capsella grandiflora
Cagra.3744s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3744: 10972-11971 Capsella grandiflora
Cagra.3744s0003 1.0kb downstream 1.0kb downstream 2678 true Scaffold3744: 8294-10971 Capsella grandiflora
Cagra.3744s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3744: 8294-9293 Capsella grandiflora
Cagra.3744s0003 2.0kb upstream 2.0kb upstream 3678 true Scaffold3744: 9294-12971 Capsella grandiflora
Cagra.3744s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3744: 10972-12971 Capsella grandiflora
Cagra.3744s0003 2.0kb downstream 2.0kb downstream 3678 true Scaffold3744: 7294-10971 Capsella grandiflora
Cagra.3744s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3744: 7294-9293 Capsella grandiflora
Cagra.3744s0003 5.0kb upstream 5.0kb upstream 6678 true Scaffold3744: 9294-15971 Capsella grandiflora
Cagra.3744s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3744: 10972-15971 Capsella grandiflora
Cagra.3744s0003 5.0kb downstream 5.0kb downstream 6678 true Scaffold3744: 4294-10971 Capsella grandiflora
Cagra.3744s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3744: 4294-9293 Capsella grandiflora
Cagra.3744s0003 10.0kb upstream 10.0kb upstream 11678 true Scaffold3744: 9294-20971 Capsella grandiflora
Cagra.3744s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3744: 10972-20971 Capsella grandiflora
Cagra.3744s0003 10.0kb downstream 10.0kb downstream 10971 true Scaffold3744: 1-10971 Capsella grandiflora
Cagra.3744s0003 10.0kb downstream 10.0kb downstream 9293 false Scaffold3744: 1-9293 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343783 5261 Brassicaceae View MSA
123839741 5264 Brassicales-Malvales View MSA
124343908 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain