Gene : Cagra.3745s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Genomic Order:  25
Name:  ? Cagra.3745s0025 Secondary Identifier:  ? PAC:28912992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3745s0025 0.5kb upstream 0.5kb upstream 2787 true Scaffold3745: 95541-98327 Capsella grandiflora
Cagra.3745s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold3745: 97828-98327 Capsella grandiflora
Cagra.3745s0025 0.5kb downstream 0.5kb downstream 2787 true Scaffold3745: 95041-97827 Capsella grandiflora
Cagra.3745s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold3745: 95041-95540 Capsella grandiflora
Cagra.3745s0025 1.0kb upstream 1.0kb upstream 3287 true Scaffold3745: 95541-98827 Capsella grandiflora
Cagra.3745s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold3745: 97828-98827 Capsella grandiflora
Cagra.3745s0025 1.0kb downstream 1.0kb downstream 3287 true Scaffold3745: 94541-97827 Capsella grandiflora
Cagra.3745s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold3745: 94541-95540 Capsella grandiflora
Cagra.3745s0025 2.0kb upstream 2.0kb upstream 4287 true Scaffold3745: 95541-99827 Capsella grandiflora
Cagra.3745s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold3745: 97828-99827 Capsella grandiflora
Cagra.3745s0025 2.0kb downstream 2.0kb downstream 4287 true Scaffold3745: 93541-97827 Capsella grandiflora
Cagra.3745s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold3745: 93541-95540 Capsella grandiflora
Cagra.3745s0025 5.0kb upstream 5.0kb upstream 7287 true Scaffold3745: 95541-102827 Capsella grandiflora
Cagra.3745s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold3745: 97828-102827 Capsella grandiflora
Cagra.3745s0025 5.0kb downstream 5.0kb downstream 7287 true Scaffold3745: 90541-97827 Capsella grandiflora
Cagra.3745s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold3745: 90541-95540 Capsella grandiflora
Cagra.3745s0025 10.0kb upstream 10.0kb upstream 12287 true Scaffold3745: 95541-107827 Capsella grandiflora
Cagra.3745s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold3745: 97828-107827 Capsella grandiflora
Cagra.3745s0025 10.0kb downstream 10.0kb downstream 12287 true Scaffold3745: 85541-97827 Capsella grandiflora
Cagra.3745s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold3745: 85541-95540 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373100 5261 Brassicaceae View MSA
123827641 5264 Brassicales-Malvales View MSA
124337846 5266 SBM View MSA
124237434 5268 Malvidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain