Gene : Cagra.3756s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23515:SF2 - HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED Genomic Order:  9
Name:  ? Cagra.3756s0009 Secondary Identifier:  ? PAC:28919795
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3756s0009 0.5kb upstream 0.5kb upstream 2913 true Scaffold3756: 44339-47251 Capsella grandiflora
Cagra.3756s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3756: 46752-47251 Capsella grandiflora
Cagra.3756s0009 0.5kb downstream 0.5kb downstream 2913 true Scaffold3756: 43839-46751 Capsella grandiflora
Cagra.3756s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3756: 43839-44338 Capsella grandiflora
Cagra.3756s0009 1.0kb upstream 1.0kb upstream 3413 true Scaffold3756: 44339-47751 Capsella grandiflora
Cagra.3756s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3756: 46752-47751 Capsella grandiflora
Cagra.3756s0009 1.0kb downstream 1.0kb downstream 3413 true Scaffold3756: 43339-46751 Capsella grandiflora
Cagra.3756s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3756: 43339-44338 Capsella grandiflora
Cagra.3756s0009 2.0kb upstream 2.0kb upstream 4413 true Scaffold3756: 44339-48751 Capsella grandiflora
Cagra.3756s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3756: 46752-48751 Capsella grandiflora
Cagra.3756s0009 2.0kb downstream 2.0kb downstream 4413 true Scaffold3756: 42339-46751 Capsella grandiflora
Cagra.3756s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3756: 42339-44338 Capsella grandiflora
Cagra.3756s0009 5.0kb upstream 5.0kb upstream 7413 true Scaffold3756: 44339-51751 Capsella grandiflora
Cagra.3756s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3756: 46752-51751 Capsella grandiflora
Cagra.3756s0009 5.0kb downstream 5.0kb downstream 7413 true Scaffold3756: 39339-46751 Capsella grandiflora
Cagra.3756s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3756: 39339-44338 Capsella grandiflora
Cagra.3756s0009 10.0kb upstream 10.0kb upstream 12413 true Scaffold3756: 44339-56751 Capsella grandiflora
Cagra.3756s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3756: 46752-56751 Capsella grandiflora
Cagra.3756s0009 10.0kb downstream 10.0kb downstream 12413 true Scaffold3756: 34339-46751 Capsella grandiflora
Cagra.3756s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3756: 34339-44338 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373335 5261 Brassicaceae View MSA
123839369 5264 Brassicales-Malvales View MSA
124350411 5266 SBM View MSA
124244779 5268 Malvidae View MSA
124041597 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain